AlphaLISA SureFire Ultra: a new mix-and-read platform for cellular HTS kinase screening in biotherapeutics, cells, and tissue lysates Michael Crouch, Sandra Iglio, Andrea Brown, Vincent Dupriez and Antony Sheehan Extracts of cells from tissue culture, or from tissue itself, can contain antibodies. Examples also include samples where biotherapeutic antibodies are tested for efficacy on cells. These antibodies can interfere with some assays, such as standard SureFire assays. The AlphaLISA SureFire Ultra assays, however, show no sensitivity to interference from antibodies due to the specific tagging systems incorporated into the kit antibodies. In addition, the AlphaLISA beads convey benefits for minimizing sample interference. 1000 Key Features of AlphaLISA SureFire Ultra 100 AlphaLISA SureFire Ultra AlphaLISA SureFire Ultra (+spiked IgG) AlphaScreen SureFire AlphaScreen SureFire (+spiked IgG) 100000 10000 1000 100 10 - 1 2 10 - 1 0 10 - 8 10 - 6 10 - 4 4 10 10 • Enhanced assay sensitivity and signal-to-noise 10 - 2 100000 SureFire Ultra CisBio Advanced 100 1000 [p-AKT S473 Lysate] mg/mL Measurement of p-AKT (Ser473) in the presence of extraneous antibodies – no interference of analyte detection with AlphaLISA SureFire Ultra by sample antibodies, whereas standard SureFire p-AKT assay is partially inhibited. Lysates of serum-activated HEK-293 cells were serially diluted in the absence or presence of non-specific extraneous rabbit antibodies (10mg/mL). Samples were then analyzed for p-AKT 1/2/3 (Ser473) with either a standard AlphaScreen SureFire kit (PerkinElmer cat# TGRA4S500) or an AlphaLISA SureFire Ultra pAKT 1/2/3 (Ser473) kit (PerkinElmer cat# ALSU-PAKT-B500). Data are presented as the signal obtained for the lysate divided by the signal obtained for lysis buffer alone. Comparison of AlphaLISA SureFire Ultra assay performance with Cisbio assays on recombinant phosphoprotein detection In order to benchmark performance of the new AlphaLISA SureFire Ultra assays with other commercial kits with similar (or longer) mix-and-read protocols, we have measured pERK and p-AKT (Ser473) recombinant proteins with AlphaLISA SureFire Ultra and CisBio HTRF assays. For p-ERK, Cisbio offers both “standard” and an “Advanced” sensitivity kit for p-ERK detection. It can be seen that AlphaLISA SureFire Ultra assays greatly outperformed each of the Cisbio assays. 1000000 Multi-target analysis of phosphorylated cellular targets with AlphaLISA SureFire Ultra SureFire Ultra CisBio Advanced CisBio Standard 1056 fold 10000 19 fold 1000 9 fold 100 0.01 0.1 1 10 100 [Recombinant ERK1] ng/mL p-AKT (Ser473) SureFire Ultra CisBio 100000 Signal 3 p-ERK 100000 1000000 1403 fold 10000 1000 17 fold AlphaLISA SureFire Ultra: Each assay kit antibody is tagged to specifically link to either the Donor or Acceptor bead. Streptavidin-coated Donor beads bind the biotinylated antibody, and the CaptSure™-coated Acceptor bead binds the other antibody via its CaptSure tag. The result is maximized sensitivity and no interference by extraneous antibodies. We have compared the performance of the new AlphaLISA SureFire Ultra assays with Cisbio assays on cellular samples. To fully test the assay sensitivities, we have measured the level of basal p-ERK in MCF-7 cells treated with or without an EGF receptor inhibitor (AG1478). The AlphaLISA SureFire Ultra p-ERK assays greatly outperformed even the Cisbio “Advanced” p-ERK assay kit for both sensitivity as well as signal window. MCF-7 cells were plated overnight at 200K cells/mL in 200 mL MEM + 10% FCS. Cells were then serum starved using MEM + 0% FCS for 2 h, and stimulated for 30 mins with a dose range of insulin. Triplicate wells lysed in 100 mL SureFire Ultra lysis buffer, and 10 µL aliquots were assayed using AlphaLISA SureFire Ultra kits. 1 • Mix-and-Read = no washing steps • AlphaLISA bead means maximized assay performance for all sample types AKT (pS473) AKT (pT308) ERK (pT202 Y204) p70S6K (pT389) eIF4E (pS209) CREB (pS133) Total AKT1 Total ERK Comparison of AlphaLISA SureFire Ultra and Cisbio p-ERK assays on cellular extracts Insulin Concentration (g/mL) Incorporating the new CaptSure™ technology, these assays provide unsurpassed sensitivity and assay flexibility for all screening requirements, including tissue extracts and antibody-containing samples (e.g. biotherapeutics). • No interference by sample antibodies = screen any sample type including from tissues or biotherapeutic antibody samples 1000000 5 The ability to measure multiple different cellular targets on a single assay plate, with no wash steps, provides the potential for full automation of HTS pathway analysis. We show here the measurement of 7 phosphoprotein targets, and total proteins for two of these targets from individual culture wells of insulin-stimulated MCF-7 cells. 100 0.01 0.1 1 10 100 1000 [Recombinant AKT1] ng/mL Recombinant p-ERK and p-AKT1 (Biaffin), were diluted with Lysis buffer of the respective kits. Assays were then carried out as described by the manufacturers’ protocols, with the AlphaLISA SureFire Ultra assays being 2 hours, and the Cisbio assays being 4 hours. Data are presented as “alpha counts” or as “HTRF ratio” values, as described by Cisbio. Samples were measured on an Envision plate reader with standard Alpha settings or TR-FRET settings. Signal However, to address the ever-increasing demands for assay sensitivity, and the need to screen complex samples such as tissue extracts and antibody-containing samples, we have developed the next-generation SureFire kinase assay: AlphaLISA® SureFire® Ultra™. Screening of antibody-containing samples with AlphaLISA SureFire Ultra Signal The phosphoprotein screening requirements of research and development laboratories in pharmaceutical companies and academia have been well served by AlphaScreen® SureFire® kits. These kits are built on the need for high throughput assays, with mix-and-read assay capabilities, providing full assay automation if required. Phospho and Total targets detection with AlphaLISA SureFire Ultra Alpha Signal AlphaLISA SureFire Ultra: Next-generation kinase screening 2 Signal:Background 1 10000 1000 100 10 -10 22.9 fold 4.1 fold 10 -8 10 -6 10 -4 [AG1478] M MCF-7 cells were plated overnight at 200,000 cells/mL in 200 mL MEM + 10% FCS, and treated the following day for 2 hours with varying concentrations of AG1478 in MEM + 1% FCS. Cells were lysed in 100 µL or 50 µL of AlphaLISA SureFire Ultra or CisBio lysis buffer, respectively, and assayed for pERK by AlphaLISA SureFire Ultra and CisBio Advanced pERK assays, according to the manufacturers’ protocols. 6 Summary The measurement of cellular activation status frequently involves the study of protein phosphorylation, as these pathways can provide a detailed understanding of pharmaceutical compound effectiveness. Such molecules can include monoclonal antibodies, where these biotherapeutics are used to modulate cell surface proteins, such as receptors or their ligands. Measurement of several different phosphoproteins can also provide a fingerprint of the cellular state, as well as information on compound specificity. Many techniques for measuring phosphoproteins are either relatively insensitive, with low S:B ratios, or the assay protocols require multiple wash steps. AlphaLISA SureFire Ultra can measure cellular phosphoproteins from any sample type, including cell lysates, tissue extracts, or samples containing antibodies (eg biotherapeutics). To benchmark the performance of AlphaLISA SureFire Ultra with another mix-and-read assay, we have compared the p-ERK and p-AKT (Ser473) assays with those of Cisbio HTRF. When assayed either on recombinant proteins, for absolute detection sensitivity, or on cellular lysates, the AlphaLISA SureFire Ultra assays greatly outperformed the Cisbio assays, and assays were completed in half the time of the Cisbio assays. The new AlphaLISA SureFire Ultra assays, therefore, provide a new and highly optimized platform for cellular analysis in all sample types, including those containing antibodies. Other AlphaLISA SureFire Ultra kits on market include p-AKT 1/2/3 (Thr308) p-p38MAPK, p-p70S6K (Thr389), p-eIF4E (Ser209), pSMAD1, p-SMAD3, p-STAT3, and p-STAT5. Further kits will be released in the near future. PerkinElmer, Inc., 940 Winter Street, Waltham, MA USA (800) 762-4000 or (+1) 203 925-4602 www.perkinelmer.com TGR BioSciences Pty Ltd, 31 Dalgleish Street, Thebarton, SA Australia (+61) 8-83546180 www.tgrbio.com
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