LA NEWSLETTER ABHORIZONS FOR CLIENTS Volume XIV, Nº 10 –11 — October – November 2014 New Procedures Androsterone . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 504005 CPT 82160. Special Instructions Note: This test is not the same as Androstenedione. (See 004705 and 500152.) Specimen Serum, frozen Volume 1 mL Minimum Volume 0.4 mL (Note: This volume does not allow for repeat testing.) Container Red-top tube only; do not use gel-barrier tube Collection Centrifuge and separate serum immediately. Freeze and submit serum in a plastic transport tube. Storage Instructions Freeze. Stable at room temperature for nine hours. Stable refrigerated and frozen for seven days. Freeze/thaw cycles stable x6. Causes for Rejection Sample received thawed; gross hemolysis Use Androsterone is a major metabolite of testosterone and androstenedione along with the enantiomer etiocholanolone. Androsterone is also part of the “backdoor pathway” from allopregnanolone to dihydrotestosterone, which has importance in certain disease states. Androsterone is one of a few steroids with neutral activity that interact with γ-aminobutyric acid (GABA) receptors. Limitations Results of this test are for investigational purposes only. The performance characteristics of this assay have been determined by LabCorp. The result should not be used as a diagnostic procedure without confirmation of the diagnosis by another medically established diagnostic product or procedure. Methodology High-pressure liquid chromatography (HPLC)/tandem mass spectrometry (MS-MS) References Kaminski RM, Marini H, Kim WJ, Rogawski MA. Anticonvulsant activity of androsterone and etiocholamolone. Epilepsia. 2005 Jun; 46(6):819-827. PubMed 15946323 Calreticulin (CALR) Mutation Analysis . . . . . . . . . 489450 CPT Call client services. Specimen Whole blood or bone marrow Volume 3-5 mL whole blood or 1-2 mL bone marrow Minimum Volume 3 mL whole blood or 1 mL bone marrow Container Lavender-top (EDTA) tube or green-top (sodium heparin) tube Special Instructions Please direct any questions regarding this test to customer service at 800-345-4363. Collection Ship specimen at room temperature. Specimen should arrive in the laboratory within 48 hours of collection. If specimen is to be stored prior to shipment, store at 2°C to 8°C. Indicate date and time of collection on the test request form. Storage Instructions Refrigerate. Stable for 72 hours at room temperature or refrigerated. Causes for Rejection Sample greater than 72 hours old; clotted blood. Use The calcium-binding endoplasmic reticulin chaperone protein, calreticulin (CALR), is somatically mutated in approximately 70% of patients with JAK2negative essential thrombocythemia (ET) and 60% to 88% of patients with JAK2-negative primary myelofibrosis. Only a minority of patients (approximately 8%) with myelodysplasia has mutations in the CALR gene. CALR mutations are rarely detected in patients with de novo acute myeloid leukemia, chronic myelogenous leukemia, lymphoid leukemia, or solid tumors. CALR mutations are not detected in polycythemia and appear to be mutually exclusive with JAK2 mutations and MPL mutations. The majority of mutational changes involve a variety of insertion or deletion mutations in exon 9 of the calreticulin gene: approximately 53% of all CALR mutations are a 52 bp deletion, while the second most prevalent mutation (approximately 32%) contains a 5 bp insertion. The remaining mutations consist of mostly deletions ranging from 1 bp to 52 bp and 1 or 2 insertion mutations. The detection of a CALR gene mutation aids in the specific diagnosis of a myeloproliferative neoplasm, and help distinguish this clonal disease from a benign reactive more indolent disease course with a lower thrombotic risk and longer overall survival (relative to those with a JAK2 mutation). Limitations This PCR assay is capable of detecting a mutant cell population with a sensitivity of 5 mutant cells per 100 normal cells. A negative result does not exclude the presence of a myeloproliferative disorder or other neoplastic process. Methodology Polymerase chain reaction (PCR); capillary electrophoresis References Klampfl T, Gisslinger H, Harutyunyan AS, et al. Somatic mutations of calreticulin in myeloproliferative neoplasms. N Engl J Med. 2013 Dec; 369(25):2379-2390. PubMed 24325356 Nangalia J, Massie CE, Baxter EJ, et al. Somatic CALR mutations in myeloproliferative neoplasms with nonmutated JAK2. N Engl J Med. 2013 Dec; 369(25):2391-2405. PubMed 24325359 c-MET Oncology FISH . . . . . . . . . . . . . . . . . . . . . . . . . . 510890 CPT Call client services. Synonyms Adenocarcinoma; Non–Small-cell Lung Cancer Specimen FNA, formalin-fixed paraffin blocks are also acceptable. Volume Five slides (4- to 5-micron thick sections) Minimum Volume Two slides (4- to 5-micron thick sections) Container Paraffin block Collection Transport to the test facility at room temperature. Storage Instructions Maintain specimen at room temperature. Causes for Rejection Broken or dirty slides; excessive cellular debris or stained slides; decalcified bone cores; absence of tumor or quantity not sufficient for analysis Use Confirmation/identification of cancer-related alterations (for lung cancer). Limitations This test was developed and its performance characteristics determined by LabCorp. It has not been cleared or approved by the US Food and Drug Administration (FDA). The FDA has determined that such clearance or approval is not necessary. Results of this test are for investigational purposes only. The result should not be used as a diagnostic procedure without confirmation of the diagnosis by another medically established diagnostic product or procedure. Methodology Fluorescence in situ hybridization (FISH) The following new/revised publications are now available: • GenoSure ArchiveSM Cell-associated viral DNA assay for HIV-1 protease, reverse transcriptase, and integrase inhibitors (L13457) • Women’s Health Program: Pap Tests and Services (L9014) Please ask your LabCorp service representative for these titles. Volume XIV, Nº 10 – 11 LabHorizons References October – November 2014 A number of tests to determine free cortisol have been devised. The free fraction depends on the concentrations of the binding proteins and cortisol, and, thus, may be calculated based on these factors. Free cortisol is best measured by equilibrium dialysis. Structure-function observations favor a direct measure of free cortisol. There are polymorphic forms of transcortin that affect cortisol binding, and glycosylation affects cortisol binding to transcortin. The Cortisol, Free, Equilibrium Dialysis and LC/MS-MS assay provides a specific direct test. References Lennerz JK, Kwak EL, Ackerman A, et al. MET amplification identifies a small and aggressive subgroup of esophagogastric adenocarcinoma with evidence of responsiveness to crizotinib. J Clin Oncol. 2011 Dec 20; 29(36):4803-4810. PubMed 22042947 CML FISH Reflex to JAK2V617F Mutation Analysis, Quali tative, With Reflex to CALR Mutation Analysis, JAK2 Exon 12 Mutation Analysis and MLP Mutation Analysis . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .511595 le Roux CW, Sivakumaran S, Alaghband-Zadeh J, Dhillo W, Kong WM, Wheeler M. Free cortisol index as a surrogate marker for serum free cortisol. Ann Clin Biochem. 2002; 39(Pt 4):406-408. PubMed 12117446 Lentjes EG, M, Romijn F, Maassen RJ, de Graaf I, Gautier P, Moolenaar AJ. Free cortisol in serum assayed by temperature-controlled ultrafiltration before fluorescence polarization immunoassay. Clin Chem. 1993 Dec; 39(12):2518-2521. PubMed 8252724 Hamrahian AH, Oseni TS, Arafah BM. Measurements of serum free cortisol in critically ill patients. N Engl J Med. 2004 Apr 15; 350(16):1629-1638. PubMed 15084695 Hill LA, Vassiliadi DA, Simard M, Pavlaki A, Perogamvros I, Hadjidakis D, Hammond GL. Two different corticosteroid-binding globulin variants that lack cortisol-binding activity in a Greek woman. J Clin Endocrinol Metab. 2012 Nov; 97(11):4260-4267. PubMed 22948765 Lin HY, Underhill C, Lei JH, Helander-Claesson A, Lee HY, Gardill BR, Muller YA, Wang H, Hammond GL. High frequency of SERPINA6 polymorphisms that reduce plasma corticosteroidbinding globulin activity in Chinese subjects. J Clin Endocrinol Metab. 2012 Apr; 97(4): E678686. PubMed 22337907 Avvakumov GV, Warmels-Rodenhiser S, Hammond GL. Glycosylation of human corticosteroid-binding globulin at aspargine 238 is necessary for steroid binding. J Biol Chem. 1993 Jan 15; 268(2):862-866. PubMed 8419363 Bartanusz V, Corneille MG, Sordo S, Gildea M, Michalek JE, Nair PV, Stewart RM, Jezova DJ. Diurnal salivary cortisol measurement in the neurosurgical-surgical intensive care unit in critically ill acute trauma patients. Clin Neurosci. 2014 Jul 22; .pii:S0967-5868(14)00309-9. PubMed 25065844 Bendel S, Karlsson S, Pettil V, Loisa P, Varpula M, Ruokonen E. Free cortisol in sepsis and septic shock. Finnsepsis Study Group. Anesth Analg. 2008 Jun; 106(6):1813-1819. PubMed 18499615 Arafah BM, Nishiyama FJ, Tlaygeh H, Hejal RJ. Measurement of salivary cortisol concentration in the assessment of adrenal function in critically ill subjects: A surrogate marker of the circulating free cortisol. Clin Endocrinol Metab. 2007 Aug; 92(8):2965-2971. PubMed 17535998 CPT Call client services. If reflex testing is performed, concomitant CPT codes/charges will apply. Synonyms Philadelphia Chromosome Special Instructions Please direct any questions regarding this test to oncology customer service at 800-345-4363. Specimen Bone marrow or peripheral blood Volume Bone marrow: 2 mL in pediatric green-top (heparin) tube; peripheral blood: 3 mL in pediatric green-top (heparin) tube Container Pediatric green-top (heparin) tube Collection Submit at room temperature using Leukemia/Lymphoma Specimen Transport Kit (supplied by LabCorp). Specimens should arrive in the laboratory within 48 hours of collection. Indicate the date and time of collection on the test request form. Storage Instructions Maintain specimen at room temperature. Use Confirm the diagnosis of CML; establish the chronic phase karyotype for comparison with blast crisis alterations; monitor residual disease Methodology Cytogenetics; fluorescence in situ hybridization (FISH) Cortisol, Free, Equilibrium Dialysis and LC/MS-MS . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 504020 CPT 82530 Specimen Serum, frozen Volume 1.6 mL Minimum Volume 0.8 mL (Note: This volume does not allow for repeat testing.) Container Red-top tube or gel-barrier tube Collection Separate within two hours of venipuncture. Transfer specimen to a plastic transport tube before freezing. Storage Instructions Freeze. Stable at room temperature or refrigerated for seven days. Stable frozen for six months. Freeze/thaw cycles stable x6. Causes for Rejection Hemolysis, icteric, lipemic Use Cortisol is the primary glucocorticoid in humans, affecting glucose control, inflammation, and response to stress. Limitations Results of this test are for investigational purposes only. The performance characteristics of this assay have been determined by LabCorp. The result should not be used as a diagnostic procedure without confirmation of the diagnosis by another medically established diagnostic product or procedure. Methodology Equilibrium dialysis and high-pressure liquid chromatography (HPLC) with tandem mass spectrometry. Additional Information Cortisol stimulates gluconeogenesis in the liver and reduces insulin secretion while increasing glucagon release by the pancreas. This increases blood glucose levels. Cortisol is also involved in inhibiting inflammatory responses and maintaining blood pressure by potentiating effects on norepinephrine. Most of circulating cortisol is bound to protein, primarily transcortin (corticosteroid-binding globulin [CBG]) and albumin. The free hormone hypothesis suggests that the unbound, or free, cortisol is the active fraction, and that this fraction is the most important clinically. Total serum cortisol may be an adequate measure of cortisol activity except when the levels of the binding proteins are abnormal such as in liver disease or acute illness. A study published in the New England Journal of Medicine demonstrates the utility of measurements of free cortisol in critically ill patients. Patients with critical illness increase cortisol secretion; however, this is best observed when free cortisol levels are measured. In the study, 40% of patients with hypoproteinemia had low levels of total cortisol even though their adrenal function was adequate as demonstrated by robust response to ACTH. Similar results were obtained when salivary cortisol was used as a marker for adrenal sufficiency during illness. Diabetes Autoimmune Profile . . . . . . . . . . . . . . . . . . . 504050 CPT Call client services. Specimen Serum, frozen Volume 1.5 mL Minimum Volume 0.5 mL (Note: This volume does not allow for repeat testing.) Container Red-top tube or gel-barrier tube Collection Transfer specimen to a plastic transport tube before freezing. To avoid delays in turnaround time when requesting multiple test on frozen samples, please submit separate frozen specimens for each test requested. Storage Instructions Freeze. Stable at room temperature or refrigerated for one day. Stable frozen for seven days. Freeze/thaw cycles: stable x3 Causes for Rejection Gross hemolysis, lipemic specimen, EDTA plasma Use Diabetes autoantibodies assessment is helpful in identifying and managing patients at risk for development of type 1 diabetes. Published positivity rates for diabetes autoantibodies in new-onset type 1 diabetes patients listed below are based on the combined analysis of GAD-65, ICA 512, insulin antibodies, and ZnT8 antibodies. The combined analysis has a 98% autoimmunity detection rate, with 1.8% diabetic individuals remaining as autoantibody-negative. fewer than 3% of type 2 diabetics have positive antibodies.1 Positive rate in new-onset type 1 diabetes patients: • GAD-65 antibodies = 68% positive • ICA 512 antibodies = 72% positive • Insulin antibodies = 55% positive • ZnT8 antibodies = 63% positive An increase in the number of positive antibodies is associated with a higher likelihood of type 1 diabetes. Methodology Enzyme-linked immunosorbent assay (ELISA), radioimmuno precipitation Footnotes 1. Wenzlau JM, Juhl K, Yu L, et al. The cation efflux transporter ZnT8 (Slc30A8) is a major autoantigen in human type 1 diabetes. Proc Natl Acad Sci U S A. 2007 Oct 23; 104(43):1704017045. PubMed 17942684 2 Volume XIV, Nº 10 – 11 LabHorizons Dihydrotestosterone (DHT), Free, LCMS/Dialysis . . 504026 Hurt C. Transmitted resistance to HIV integrase strand-transfer inhibitors: Right on schedule. Antivir Ther. 2011; 16(2):137-140. PubMed 21447861 CPT Call client services. Synonyms Free 5-α-dihydrotestoterone; Free dihydrotestosterone Specimen Serum (preferred) or plasma, frozen Volume 3 mL Minimum Volume 1.2 mL (Note: This volume does not allow for repeat testing.) Container Red-top tube, gel-barrier tube, or green-top (heparin) tube Collection Separate serum or plasma from cells within four hours of collection. Send serum or plasma in a plastic transport tube. Transfer specimen to a plastic transport tube before freezing. To avoid delays in turnaround time when requesting multiple test on frozen samples, please submit separate frozen specimens for each test requested. Storage Instructions Freeze. Stable at room temperature, refrigerated, or frozen for 14 days. Freeze/thaw cycles: stable x6 Causes for Rejection EDTA plasma, grossly hemolyzed, ecteric or lipemic sample Use Dihydrotestosterone measurment is used to diagnose 5a-reductase deficiency and for the evaluation of androgen utilization. Dihydrotestosterone is produced by the reduction of testosterone by 5α-reductase in the target organs. Circulating dihydrotestosterone is tightly bound to sex hormonebinding globulin. The free fraction represents the dihydrotestosterone available to act on tissues. Limitations This test was developed and the performance characteristics were validated by LabCorp. It has not been cleared or approved by the US Food and Drug Administration (FDA). Methodology Equilibrium dialysis, high-performance liquid chromatography/ tandem mass spectrometry (HPLC/MS-MS) Human Immunodeficiency Virus 1 (HIV-1) DNA Sequen cing Protease − Reverse Transcriptase . . . . . . . . . 551730 CPT Call client services. Synonyms Cell-associated Viral DNA; HIV-1 Genotype; Resistance Analysis Specimen Whole blood, frozen Volume 4 mL Collection Collect specimen in lavender-top (EDTA) tube. Do not centrifuge. Ship frozen. To avoid delays in turnaround time when requesting multiple tests on frozen samples, please submit separate frozen specimens for each test requested. Storage Instructions Freeze. Causes for Rejection Quantity not sufficient for analysis; heparinized plasma; non-frozen specimen Use Detect resistance of HIV-1 to protease and reverse transcriptase inhibitors in cell-associated viral DNA. Limitations This procedure should be used for patients with documented HIV-1 infection and undetectable viral load or low level viremia. Methodology Polymerase chain reaction (PCR) amplification and next generation DNA sequencing References Panel on Antiretroviral Guidelines for Adults and Adolescents—A Working Group of the Office of AIDS Research Advisory Council (OARAC). Guidelines for the Use of Antiretroviral Agents in HIV-1-Infected Adults and Adolescents. Washington, DC: Department of Health and Human Services; May 1, 2014. Günthard HF, Aberg JA, Eron JJ, et al. Antiretroviral treatment of adult HIV infection: 2014 recommendations of the International Antiviral Society-USA Panel. JAMA. 2014 Jul 23-30; 312(4):410-425. PubMed 25038359 Heroin Metabolite (6-AM), Screen Only, Urine . . . 701875 Human Immunodeficiency Virus 1 (HIV-1) GenoSure ArchiveSM . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 551776 CPT Call client services. Special Instructions This assay is designed for pain management. It is not intended for workplace testing and does not comply with state regulatory workplace testing programs. Specimen Urine Volume 20 mL Container Plastic urine container Storage Instructions Maintain specimen at room temperature. Stability: If arrival at lab will extend beyond seven days, refrigerate. Use Detect heroin and 6-acetylmorphine Methodology Immunoassay (IA) CPT Call client services. Synonyms Cell-associated Viral DNA; HIV-1 Genotype; Resistance Analysis Specimen Whole blood, frozen Volume 4 mL Container Lavender-top (EDTA) tube Collection Collect specimen in lavender-top (EDTA) tube. Do not centrifuge. Ship frozen. To avoid delays in turnaround time when requesting multiple tests on frozen samples, please submit separate frozen specimens for each test requested. Storage Instructions Freeze. Causes for Rejection Quantity not sufficient for analysis; heparinized plasma; nonfrozen specimen Use Detect resistance of HIV-1 to protease, reverse transcriptase, and integrase inhibitors in cell-associated viral DNA. Limitations This procedure should be used for patients with documented HIV-1 infection and undetectable viral load or low level viremia. Methodology Polymerase chain reaction (PCR) amplification and next generation DNA sequencing References Human Immunodeficiency Virus 1 (HIV-1) DNA Sequen cing Integrase . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 551965 CPT Call client services. Synonyms Cell-associated Viral DNA; HIV-1 Genotype; Resistance Analysis Specimen Whole blood, frozen Volume 4 mL Collection Collect specimen in lavender-top (EDTA) tube. Do not centrifuge. Ship frozen. To avoid delays in turnaround time when requesting multiple tests on frozen samples, please submit separate frozen specimens for each test requested. Storage Instructions Freeze. Causes for Rejection Quantity not sufficient for analysis; heparinized plasma; non-frozen specimen Use Detect resistance of HIV-1 to integrase inhibitors in cell-associated viral DNA. Limitations This procedure should be used for patients with documented HIV-1 infection and undetectable viral load or low level viremia. Methodology Polymerase chain reaction (PCR) amplification and next generation DNA sequencing References Panel on Antiretroviral Guidelines for Adults and Adolescents—A Working Group of the Office of AIDS Research Advisory Council (OARAC). Guidelines for the Use of Antiretroviral Agents in HIV-1-Infected Adults and Adolescents. Washington, DC: Department of Health and Human Services; May 1, 2014. Günthard HF, Aberg JA, Eron JJ, et al. Antiretroviral treatment of adult HIV infection: 2014 recommendations of the International Antiviral Society-USA Panel. JAMA. 2014 Jul 23-30; 312(4):410-425. PubMed 25038359 October – November 2014 Panel on Antiretroviral Guidelines for Adults and Adolescents—A Working Group of the Office of AIDS Research Advisory Council (OARAC). Guidelines for the Use of Antiretroviral Agents in HIV-1-Infected Adults and Adolescents. Washington, DC: Department of Health and Human Services; May 1, 2014. Günthard HF, Aberg JA, Eron JJ, et al. Antiretroviral treatment of adult HIV infection: 2014 recommendations of the International Antiviral Society-USA Panel. JAMA. 2014 Jul 23-30; 312(4):410-425. PubMed 25038359 Hurt C. Transmitted resistance to HIV integrase strand-transfer inhibitors: Right on schedule. Antivir Ther. 2011; 16(2):137-140. PubMed 21447861 Human Immunodeficiency Virus 1 (HIV-1) GenoSure ArchiveSM Plus Trofile® DNA . . . . . . . . . . . . . . . . 552020 CPT Call client services. Synonyms Cell-associated Viral DNA; HIV-1 Genotype; Resistance Analysis Specimen Whole blood, frozen Volume 8 mL Container Lavender-top (EDTA) 3 Volume XIV, Nº 10 – 11 LabHorizons Collection Collect specimen in two lavender-top (EDTA) tubes. Do not centrifuge. Ship frozen. To avoid delays in turnaround time when requesting multiple tests on frozen samples, please submit separate frozen specimens for each test requested. Storage Instructions Freeze. Causes for Rejection Quantity not sufficient for analysis; heparinized plasma; nonfrozen specimen Use Detect resistance of HIV-1 to protease, reverse transcriptase, and integrase inhibitors (GenoSure ArchiveSM) and detect HIV-1 coreceptor tropism (Trofile® DNA) in cell-associated viral DNA; determine eligibility for CCR5 antagonist therapy, such as maraviroc (Selzentry®). Limitations This procedure should be used for patients with documented HIV-1 infection and undetectable viral load or low level viremia. Methodology GenoSure ArchiveSM: Polymerase chain reaction (PCR) amplification and next generation DNA sequencing; Trofile® DNA: Polymerase chain reaction (PCR) amplification and viral culture References October – November 2014 mutations are rarely detected in patients with de novo acute myeloid leukemia, chronic myelogenous leukemia, lymphoid leukemia, or solid tumors. CALR mutations are not detected in polycythemia and appear to be mutually exclusive with JAK2 mutations and MPL mutations. JAK2 exon 12 mutation status is associated with erythrocytosis and atypical marrow morphology. Mutation analysis may be used to differentiate reactive conditions from malignant erythrocytosis. JAK2 exon 12 mutations appear to be specific to polycythemia vera (PV) or idiopathic erythrocytosis. MPL(myeloproliferative leukemia virus oncogene homology) belongs to the hematopoietin superfamily and enables its ligand thrombopoietin, to facilitate both global hematopoiesis and megakaryocyte growth and differentiation. MPL W515 mutations are present in patients with primary myelofibrosis (PMF) and essential thrombocythemia (ET) at a frequency of approximately 5% and 1%, respectively. The S505 mutation is detected in patients with hereditary thrombocythemia. Limitations This assay has a sensitivity of approximately 5% for the detection of cells containing the JAK2 mutations and CALR mutations, 10% to 20% for MPL mutations in a background of nonmutant cells. Methodology Allele-specific polymerase chain reaction (PCR); capillary electrophoresis; Sanger sequencing References Panel on Antiretroviral Guidelines for Adults and Adolescents—A Working Group of the Office of AIDS Research Advisory Council (OARAC). Guidelines for the Use of Antiretroviral Agents in HIV-1-Infected Adults and Adolescents. Washington, DC: Department of Health and Human Services; May 1, 2014. Günthard HF, Aberg JA, Eron JJ, et al. Antiretroviral treatment of adult HIV infection: 2014 recommendations of the International Antiviral Society-USA Panel. JAMA. 2014 Jul 23-30; 312(4):410-425. PubMed 25038359 Hurt C. Transmitted resistance to HIV integrase strand-transfer inhibitors: Right on schedule. Antivir Ther. 2011; 16(2):137-140. PubMed 21447861 Whitcomb JM, Huang W, Fransen S, et al. Development and characterization of a novel single-cycle recombinant-virus assay to determine human immunodeficiency virus type 1 coreceptor tropism. Antimicrob Agents Chemother. 2007 Feb; 51(2):566-575. PubMed 17116663 Baxter EJ, Scott LM, Campbell PJ, et al. Acquired mutation of the the tyrosine kinase JAK2 in human myeloproliferative disorders. Lancet. 2005 Mar 19-25; 365(9464):1054-1061. PubMed 15781101 James C, Ugo V, LeCouédic JP, et al. A unique clonal JAK2 mutation leading to constitutive signalling causes polycythaemia vera. Nature. 2005; 434(7037):1144-1148. PubMed 15793561 Jones AV, Kreil S, Zoi K, et al. Widespread occurrence of the JAK2V617F mutation in chronic myeloproliferative disorders. Blood. 2005; 106(6):2162-2168. PubMed 15920007 Kilpivaara O, Levine RL. JAK2 and MPL mutations in myeloproliferative neoplasms: Discovery and science. Leukemia. 2008 Oct; 22(10):1813-1817. PubMed 18754026 Klampfl T, Gisslinger H, Harutyunyan AS, et al. Somatic mutations of calreticulin in myeloproliferative neoplasms. N Engl J Med. 2013 Dec; 369(25):2379-2390. PubMed 24325356 Kralovics R, Passamonti F, Buser AS, et al. A gain-of-function mutation of JAK2 in myeloproliferative disorders. N Engl J Med. 2005 Apr 28; 352(17):1779-1790. PubMed 15858187 Liu K, Martini M, Rocca B, et al. Evidence for a founder effect of the MPL-S505N mutation in eight Italian pedigrees with hereditary thrombocythemia. Haematologica. 2009 Oct; 94(10):1368-1374. PubMed 19608689 Nangalia J, Massie CE, Baxter EL, et al. Somatic CALR mutations in myeloproliferative neoplasms with nonmutated JAK2. N Engl J Med. 2013 Dec; 369(25):2391-2405. PubMed 24325359 Pardanani AD, Levine RL, Lasho T, et al. MPL515 mutations in myeloproliferative and other myeloid disorders: A study of 1182 patients. Blood. 2006 Nov 15; 108(10):3472-3476. PubMed 16868251 Tefferi A, Gilliland DG. The JAK2 V617F tyrosine kinase mutation in myeloproliferative disorders: Status report and immediate implications for disease classification and diagnosis. Mayo Clin Proc. 2005; 80(7):947-958. PubMed 16007902 JAK2V617F Mutation Analysis, Qualitative, with Reflex to CALR Mutation Analysis, JAK2 Exon 12 Mutation Analysis and MPL Mutation Analysis . . . . . . . . . . . . . .489395 CPT Call client services. If reflex testing is performed, concomitant CPT codes/charges will apply. Synonyms CALR Mutation Analysis; JAK2 Exon 12 Mutation Detection; Janus Kinase 2 V617F Mutation Detection; MPL Mutation Analysis Special Instructions Please direct any questions regarding this test to customer service at 800-345-4363. Specimen Whole blood or bone marrow Volume 3-5 mL whole blood or 1-2 mL bone marrow Minimum Volume 3 mL whole blood or 1 mL bone marrow Container Lavender-top (EDTA) tube or green-top (sodium heparin) tube Collection Submit at room temperature. Specimens should arrive in the laboratory within 48 hours of collection. Indicate date and time of collection on the test request form. Storage Instructions Refrigerate. Ship specimen at room temperature. Specimen should arrive in the laboratory within 48 hours of collection. If specimen is to be stored prior to shipment, store at 2°C to 8°C. Indicate date and time of collection on the test request form. Causes for Rejection Sample greater than 72 hours old; clotted blood Use This test will assess for the JAK2V617F (exon 14) mutation first and will reflex to CALR mutation analysis, JAK2 exon 12 mutation analysis and MPL mutation analysis when the JAK2V617F mutation is negative. The JAK2V617F (exon 14) mutation analysis can be used in conjunction with bone marrow histology and cytogenetic analysis to assist in the diagnosis of myeloproliferative neoplasms (MPN). The JAK2V617F mutation is found in almost all patients with polycythemia vera (PV) and in nearly one-half of those with idiopathic myelofibrosis (IMF) and with essential thrombocythemia (ET). The calcium-binding endoplasmic reticulin chaperone protein, calreticulin (CALR), is somatically mutated in approximately 70% of patients with JAK2-negative essential thrombocythemia (ET) and 60% to 88% of patients with JAK2-negative primary myelofibrosis. Only a minority of patients (approximately 8%) with myelodysplasia has mutations in CALR gene. CALR ZnT8 Antibodies . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 503995 CPT 86341 Synonyms Zinc Transporter 8 Autoantibodies Specimen Serum (preferred) or plasma (heparin) Volume 0.5 mL Minimum Volume 0.2 mL (Note: This volume does not allow for repeat testing.) Container Red-top tube, gel-barrier tube, or green-top (heparin) tube Collection Serum or plasma must be separated from cells within 45 minutes of venipuncture. Transfer separated serum or plasma to a plastic transport tube. To avoid dealys in turnaround time when requesting multiple tests on frozen samples, please submit separate frozen specimens for each test requested. Storage Instructions Freeze. Stable at room temperature, refrigerated, or frozen for seven days. Freeze/thaw cycles: stable x6 Causes for Rejection Gross hemolysis, lipemic specimen, EDTA plasma Use Detects zinc transporter 8 autoantibodies, an autoimmune diabetes marker that is instrumental in the diagnosis of new-onset type 1 diabetes Methodology Enzyme-linked immunosorbent assay (ELISA) 4 Volume XIV, Nº 10 – 11 LabHorizons October – November 2014 Ebola Virus Disease (EVD) not submit specimens to LabCorp for any testing (eg, CBC, malaria, routine chemistry, serology, blood culture) from patients suspected for EVD until results for EVD laboratory testing are completed by the CDC or other public health agency and EVD has been ruled out. EVD is an infection of public health significance. If you are either considering a diagnosis of EVD, or if you are seeking to rule out EVD in a patient, then you should first consult the Centers for Disease Control and Prevention (CDC) EVD criteria to assess the patient for consistent symptoms and stated risk factors. If the patient is then suspected of having EVD, contact your state public health laboratory for further instructions. Specimens from the patient for diagnostic testing for Ebola virus would then be collected and sent by you to a specified laboratory as directed by the public health laboratory. For CDC EVD criteria, visit the CDC website at: http://www.cdc.gov/vhf/ebola/hcp/case-definition.html. For additional EVD information, visit the American Society for Microbiology website at: https://www.asm.org/images/PSAB/Ebola9-10-14.pdf. LabCorp does not collect or process specimens from patients suspected of having EVD. LabCorp does not test specimens to rule out EVD. Do Methodology Change for Cryptococcus Antigen Effective January 5, 2015 Effective January 5, 2015, testing for Cryptococcus antigen will be performed using the lateral flow immunochromographic methodology. The new methodology detects both C gattii and C neoformans but does not differentiate between the two species. Positive results are reflexed to titers and billed at an additional charge. As the new methodology employs different antibodies, LabCorp will offer a rebaseline test at no charge. The rebaseline test will be available for a period of 90 days after the discontinuation of the current assays. Please refer to the table below for relevant test numbers. Clients who currently receive results though an electronic interface (ie, EMR), must update the tests in their respective systems. Please direct any questions to your local LabCorp service representative. Additionally, following the College of American Pathologists’ guidelines,1 CSF samples submitted for initial diagnosis that test positive must have a fungal (mycology) culture performed. If a fungal culture has not been requested on a CSF sample and the screen is positive, a fungal culture will be performed at no additional charge. ____________________ 1. College of American Pathologists. Immunology Checklist. Northfield, Ill: CAP; April 21, 2014: IMM.41840; page 35. New Assay (Available January 5, 2015) New Test Nº CPT(s) Discontinued Test Nº CPT(s) Cryptococcus Antigen 183025 87899 006551 87899 Cryptococcus Antigen 183060 Cryptococcus Antigen, Cerebrospinal Fluid. 183016 87899 160747 87899 Cryptococcus Antigen, Cerebrospinal Fluid 183048 5 Rebaseline Assays (Available Until April 3, 2015) Rebaseline Test Nº Volume XIV, Nº 10 – 11 LabHorizons October – November 2014 Uq pdates to the Directory of Services and Interpretive Guide (DoS) Test Name Nº Field/Change (Only fields that change are included here.) Aldosterone:Renin Ratio 004354 Volume 1 mL serum and 1 mL plasma Minimum Volume 0.5 mL serum and 0.8 mL plasma (Note: This volume does not allow for repeat testing.) Androsterone 504005 Specimen Serum (preferred) or EDTA plasma, frozen Container Red-top tube (Do not use gel-barrier tube.) or lavender-top (EDTA) tube Special Instructions: Note: This test is not the same as Androstenedione. (See 004705 and 500152.) Collection Centrifuge and separate serum or plasma immediately. Freeze. Send serum or plasma in a plastic transport tube Antidepressant Drug Profile, Whole Blood 791490 Volume 7 mL whole blood or 3 mL serum or plasma Bordetella pertussis Antibodies, IgG 161745 Reference Interval • Negative: <0.95 index • Equivocal: 0.95 - 1.04 index • Positive: >1.04 index Calprotectin, Fecal 123255 Storage Instructions Stool specimens should be received by the laboratory within 10 days of collection. Samples are stable for four days before testing at 2°C to 8°C. Freeze at -20°C if samples will not be tested within four days. Temperature should not exceed 30°C during shipment. Causes for Rejection Serum or plasma received; stool contaminated with urine; sample outside of the container; specimen older than 10 days of collection before tested; samples taken from diapers unless portion taken has not been in contact with diaper material; preserved stool received Use An in vitro diagnostic to aid in the diagnosis of inflammatory bowel disease (IBD), Crohn’s disease, and ulcerative colitis, and to differentiate IBD from irritable bowel syndrome (IBS) in conjunction with other clinical and laboratory findings. Limitations • False-negative results could occur in patients who have granulocytopenia due to bone marrow depression. • Some patients who are taking NSAIDs will have elevations in their fecal calprotectin levels. • Results may not be clinically applicable to children younger than two years old, who have mildly increased calprotectin levels. • Patients with IBD fluctuate between active (inflammatory) and inactive stages of the disease. These stages must be considered when using the calprotectin test. • The use of proton pump inhibitors (PPIs), colitis, and diverticular disease may also lead to elevated calprotectin levels. Patients affected by untreated celiac disease may occasionally show elevated calprotectin values. • Other intestinal ailments, including many gastrointestinal infections and colorectal cancer, can result in elevated levels of calprotectin. These specimens will test positive with this test. Consequently, a diagnosis of active IBD cannot be established solely on the basis of a positive result with this test. • Fecal calprotectin is an indicator of neutrophilic presence in the stool and is not specific for IBD. Methodology Quantitative enzyme-linked immunosorbent assay (ELISA) Additional Information Various types of organic disease in the gastrointestinal tract will cause damage to the intestinal lining (mucosa layer). Such damage may vary from increased permeability of the mucosa to inflammation, which may be toxic or chemotactic (ie, they stimulate leukocytes, in particular polymorphonuclear granulocytes [PMNs] to migrate into the gut lumen where they release their contents, including antimicrobial substances like calprotectin). This protein constitutes about 60% of total proteins in the cytoplasm of PMN and can be estimated in small, random stool samples even after storage for seven days at ambient temperature. The concentration of calprotectin in stool reflects the number of PMNs migrating into the gut lumen. Calprotectin is a calcium- and zinc-binding protein produced by PMNs, monocytes, and squamous epithelial cells, except those in normal skin. After binding calcium, it can resist degradation by leukocytic and bacterial enzymes. By competing with different enzymes for limited local amounts of zinc, calprotectin may inhibit many zinc-dependent enzymes and thereby kill microörganism or animal and human cells in culture. Calprotectin can be detected even in small (<1 g) random stool samples. Furthermore, organic diseases of the bowel give a strong fecal calprotectin signal (ie, elevations are often five to several thousand times the upper reference in healthy individuals indicating intestinal inflammation). Patients with organic or functional abdominal disorders may have similar symptoms, and clinical examination alone may not be sufficient to support a specific diagnosis. Additionally, the calprotectin test has been demonstrated to be a marker of inflammatory bowel disease in both children and adult patients. Inflammatory bowel disease (IBD) (eg, ulcerative colitis and Crohn’s disease), may appear from early childhood to late adulthood, and the diagnosis is often delayed due to vague symptoms or reluctance to perform endoscopy and biopsy. Cortisol 004051 Storage Instructions Room temperature. Cortisol, ACTH Stimulation 140761 Cortisol, AM 104018 Cortisol, AM & PM 104000 Cortisol, PM 104026 Creatine 002402 Volume 1 mL Minimum Volume 0.5 mL D-Dimer 115188 Volume 2 mL Minimum Volume 1 mL Reference Interval 0.00-0.49 mg/L FEU Dextromethorphan (DM) and Metabolite, Quantitative, Urine 790340 Storage Instructions Refrigerated; stable for two weeks. Stable at room temperature for five days. Stable frozen for six months. Ecarin Clotting Time (ECT) 500190 Reference Interval 20.1−24.1 seconds Note: For the most current test information, please consult the online Directory of Services and Interpretive Guide at https://www.labcorp.com/wps/portal/provider/testmenu. 6 Volume XIV, Nº 10 – 11 LabHorizons October – November 2014 Uq pdates to the Directory of Services and Interpretive Guide (DoS) Test Name Estriol, Serum Nº 004614 Field/Change (Only fields that change are included here.) Reference Interval Gestational Week Median (ng/mL) Central 95% Range (ng/mL) 27 4.6 2.6-7.1 28 4.7 2.6-7.8 29 5.0 2.6-8.6 30 5.5 2.7-9.6 31 6.1 2.9-11.0 32 6.9 3.2-12.7 33 8.0 3.4 to > 13.3 34 9.3 3.7 to > 13.3 35 11.3 4.3 to > 13.3 36 > 13.3 5.3 to > 13.3 37 > 13.3 6.2 to > 13.3 38 > 13.3 7.4 to > 13.3 39 > 13.3 8.1 to > 13.3 40 > 13.3 8.5 to > 13.3 Hemoglobin, Sickle Cell, Prenatal, DNA 451391 Volume 12 mL amniotic fluid or 20 mg CVS and 5 mL blood per parental sample Minimum Volume 10 mL amniotic fluid or 10 mg CVS and 2 mL blood per parental sample. Hepatitis Be Antigen 006619 Container Gel-barrier tube or lavender-top (EDTA) tube Storage Instructions Refrigerate. Samples can be stored at 2°C to 8°C for seven days or at -20°C for one year. Stable for three freeze/thaw cycles. Causes for Rejection Non-EDTA plasma specimen; heat-inactivated specimens; cord blood; cadaver specimens; or body fluids other than serum or EDTA plasma Use The HBe assay is intended for use as an aid in the diagnosis of patients with hepatitis B viral infections, when used in conjunction with results from other HBV marker assays. Limitations Assay performance characteristics have not been established for (1) children younger than 17 years of age, (2) pregnant women, or (3) populations of immunocompromised or immunosuppressed patients. Methodology Immunochemiluminometric assay (ICMA) Hepatitis B Virus (HBV) DNA, Quantitative Real-time PCR With Reflex to HBV Genotype 551722 Use This test quantitates HBV DNA in serum or plasma with reflex to HBV genotype if ≥ 500 IU/mL is detected. Limitations The quantitative test has a range of 20 IU/mL to 170,000,000 IU/mL. The genotype assay is only triggered when the quantitative test result is ≥500 IU/mL. Hepatitis B Virus (HBV) DNA, Quantitative Real-time PCR With Reflex to HBV Genotype Plus Drug Resistance 551735 Use This test quantitates HBV DNA in serum or plasma with reflex to HBV genotype and drug resistance testing if ≥ 500 IU/mL is detected. Limitations The quantitative test has a range of 20 IU/mL to 170,000,000 IU/mL. The genotype assay is only triggered when the quantitative test result is ≥ 500 IU/mL. Hepatitis B Virus (HBV) Genotype 551710 Collection Centrifuge sample within six hours of collection, transfer plasma/serum to a polypropylene screw-cap tube and freeze. To avoid delays in turnaround time when requesting multiple tests on frozen samples, please submit separate frozen specimens for each test requested. Limitations This assay may not be successful when the HBV viral load is <500 IU/mL. This test was developed and its performance characteristics determined by LabCorp. It has not been cleared or approved by the US Food and Drug Administration (FDA). The FDA has determined that such clearance or approval is not necessary. Hepatitis B Virus (HBV) Genotyping Plus Drug Resistance 551750 Collection Centrifuge sample within six hours of collection, transfer plasma/serum to a polypropylene screw-cap tube and freeze. To avoid delays in turnaround time, when requesting multiple tests on frozen samples, please submit separate frozen specimens for each test requested. Limitations This assay may not be successful when the HBV viral load is < 500 IU/mL. This test was developed and its performance characteristics determined by LabCorp. It has not been cleared or approved by the US Food and Drug Administration (FDA). The FDA has determined that such clearance or approval is not necessary. Hepatitis C Virus (HCV) Genotyping With 1a Subtype Reflex to Hepatitis C Virus (HCV) GenoSure® NS3/4A 550555 Volume 3.0 mL Minimum Volume 2.0 mL Collection Collect specimen in two PPT™ tubes, gel-barrier tubes, yellow-top (ACD) tubes, or lavender-top (EDTA) tubes. Do not use green-top (heparin) tubes. Centrifuge specimen within six hours of collection, remove serum/plasma, and transfer specimen to polypropylene screw-capped tubes, and freeze. Specimens drawn into PPT™s need to be centrifuged within six hours and frozen. Ship frozen. To avoid delays in turnaround time when requesting multiple tests on frozen samples, please submit separate frozen specimens for each test requested. Use Genotyping of the six major HCV types and their most common subtypes. Assessment of drug susceptibility by nucleic acid sequencing of a patient’s hepatitis C virus (HCV) to the NS3/4A protease inhibitors. Detects Q80K polymorphism. Hepatitis C Virus (HCV), Quantitative, Real-time PCR (Graphical) 550070 Use Determine the number of international units (IU) of hepatitis C virus (HCV) RNA per milliliter in serum or plasma in known HCV-positive patients HER-2/CEP17, FISH 483248 HER-2/CEP17, FISH With Reflex to HERmark® if FISH Equivocal 483410 Causes for Rejection Fixative other than neutral buffered formalin; quantity not sufficient for analysis; tumor other than breast tumor Note: For the most current test information, please consult the online Directory of Services and Interpretive Guide at https://www.labcorp.com/wps/portal/provider/testmenu. 7 Volume XIV, Nº 10 – 11 LabHorizons October – November 2014 Uq pdates to the Directory of Services and Interpretive Guide (DoS) Nº Field/Change (Only fields that change are included here.) HER-2 Immunohistochemistry (IHC), Breast With Reflex to FISH if 0, 1+, or 2+ by IHC Test Name 483320 Collection Specimen should be fixed in 10% neutral-buffered formalin. Fixation time should be between 6 and 72 hours according to ASCO/CAP guidelines; however, the package insert indicates optimum fixation time between 18 and 24 hours. Causes for Rejection Tumor other than breast tumor HER-2 Immunohistochemistry (IHC) Breast With Reflex to FISH if 2+ by IHC 483289 Collection Specimen should be fixed in 10% neutral-buffered formalin. Fixation time should be between 6 and 72 hours according to ASCO/CAP guidelines; however, the package insert indicates optimum fixation time between 18 and 24 hours. Causes for Rejection Tumor other than breast tumor HER-2 Immunohistochemistry (IHC), Gastric With Reflex to FISH if 2+ by IHC 483360 Collection FFPE tissue, preserved in 10% neutral buffered formalin, fixed for 18 to 24 hours. ASCO/CAP 2013 guidelines recommend fixation time between 6 and 72 hours for breast tissue; however, special ASCO/CAP guidelines have not been established for gastric cancer samples. Causes for Rejection Tumor other than gastric tumor HER-2 Immunohistochemistry (IHC) With Reflex to FISH if 2+ by IHC With Reflex to HERmark® if FISH Equivocal 483200 Collection Specimen should be fixed in 10% neutral-buffered formalin. Fixation time should be between 6 and 72 hours according to ASCO/CAP guidelines; however, the package insert indicates optimum fixation time between 18 and 24 hours. Causes for Rejection Tumor other than breast tumor HER-2 Immunohistochemistry (IHC) With Reflex to HERmark® if 2+ by IHC 480845 Collection Specimen should be fixed in 10% neutral-buffered formalin. Fixation time should be between 6 and 72 hours according to ASCO/CAP guidelines; however, the package insert indicates optimum fixation time between 18 and 24 hours. Causes for Rejection Tumor other than breast tumor HER-2/neu IHC, Breast Paraffin 480376 Collection Specimen should be fixed in 10% neutral-buffered formalin. Fixation time should be between six and 72 hours according to ASCO/CAP guidelines; however, the package insert indicates optimum fixation time between 18 and 24 hours. Causes for Rejection Tumor other than breast tumor HER-2/neu Immunohistochemistry (IHC), Gastric Paraffin 480226 Collection FFPE tissue, preserved in 10% neutral buffered formalin, fixed for 18 to 24 hours. ASCO/CAP 2013 guidelines recommend fixation time between 6 and 72 hours for breast tissue; however, special ASCO/CAP guidelines have not been established for gastric cancer samples. Causes for Rejection Tumor other than gastric tumor HER-2/neu FISH, G stric, Paraffin 483340 Causes for Rejection Fixative other than neutral buffered formalin; quantity not sufficient for analysis; tumor other t an gastric tumor Hereditary Angioedema (HAE) 123020 Specimen Serum, frozen and room temperature Volume Two aliquots: 0.5 mL frozen, 2 mL at room temperature Minimum Volume Two aliquots: 0.1 mL frozen, 1 mL at room temperature Collection Collect sample on ice. Separate serum from cells in a refrigerated centrifuge. If a refrigerated centrifuge is not available, chill centrifuge tube carriers before centrifuging. Transfer aliquots of serum to each of two plastic transport tubes. Freeze the required 0.5 mL frozen aliquot immediately at -20°C. Storage Instructions Frozen sample should not be stored at room temperature (15°C to 30°C) for longer than six hours. Required room temperature samples are stable for three days, frozen samples for 14 days. Causes for Rejection Plasma specimen; specimen not drawn on ice; stored specimen not frozen; gross bacterial contamination; excess lipemia; hemolysis; separate specimens not received (room temperature and frozen) Limitations Rheumatoid factors (>200 IU/mL) significantly increase the apparent C4 concentration. This profile is not intended for the diagnoses of estrogen-dependent, estrogen-associated, drug-induced, or idiopathic angioedema. Also note that patients taking anabolic steroids may have falsely elevated C4 values thus limiting the effectiveness of the profile’s logic. Consider retesting the patient after discontinuation of anabolic steroids. Immunofixation (IFE) 001685 Volume 2 mL Lactate Dehydrogenase (LD) Isoenzymes 001842 Volume 2 mL Lactic Acid Dehydrogenase (LD) 001115 Reference Interval a h Age Male (IU/L) Female (IU/L) 1 – 7 d 123 – 237 123 – 237 8 – 30 d 126 – 331 130 – 275 1 – 11 m 143 – 381 128 – 376 1 – 3 y 195 – 361 192 – 352 4 – 6 y 180 – 313 180 – 311 7 – 9 y 166 – 291 166 – 290 10 – 12 y 155 – 280 135 – 260 13 – 15 y 126 – 244 118 – 215 16 – 17 y 118 – 222 114 – 209 >17 y 121 – 224 119 – 226 Note: For the most current test information, please consult the online Directory of Services and Interpretive Guide at https://www.labcorp.com/wps/portal/provider/testmenu. 8 Volume XIV, Nº 10 – 11 LabHorizons October – November 2014 Uq pdates to the Directory of Services and Interpretive Guide (DoS) Nº Field/Change (Only fields that change are included here.) Lipid Cascade With Reflex to Lipoprotein Particle Assessment by NMR Test Name 361946 Storage Instructions Room temperature: Gel-barrier tube, green-top (heparin) tube, or lavender-top (EDTA) tube. Stable at room temperature for six hours or refrigerated for 10 days. Frozen is not acceptable. Refrigerate: NMR LipoTube (black-and-yellow-top tube) or serum transport tube. Do not freeze sample, and do not store at room temperature. Stable refrigerated for six days and room temperature is not acceptable. Frozen is not acceptable. Lipoprotein Phenotyping Profile 235036 Volume 2 mL Metabolic Syndrome Profile 335884 Collection Separate serum or plasma from cells within 45 minutes of collection. Label gray-top tube as plasma. Limitations This profile should not be performed on patients who have, in the preceding three months, suffered a myocardial infarction or similar traumatic episode, including acute infection or inflammation. Multiple Myeloma Profile, FISH 510325 Special Instructions Indicate pertinent clinical diagnosis and previous cytogenetics studies on the test request form. If insufficient plasma cells available, the following probe priority will be followed: Previous abnormality, p53, FGFR3/ IGH, MAF/IGH, 13q14, 1p/1q. CCND1/IGH, 7/9/15 aneuploidy probes. Oncology Therapeutic Panel (IntelliGENSM) 489600 Use IntelliGENSM is a next-generation sequencing (NGS) panel that contains ~2,600 mutations within 50 common oncogenes and tumor suppressor genes. The information provided in this analysis may assist in making cancer treatment decisions involving target therapies and other therapeutic indications related to the molecular alterations detected in the tumor sample. Methodology IntelliGENSM is an NGS “hot-spot” panel that contains a single pool of 207 primer pairs used to perform multiplex PCR for preparation of amplicon libraries from genomic “hot-spot” regions frequently mutated in human cancer genes. It covers ~2,600 COSMIC mutations within 50 common oncogenes and tumor suppressor genes. Pigweed, Common 602484 Minimum Volume 0.1 mL Renin Activity and Aldosterone 000703 Volume 1.0 mL serum and 1.0 mL plasma Minimum Volume 0.5 mL serum and 0.8 mL plasma (Note: This volume does not allow for repeat testing.) Renin Activity, Plasma 002006 Volume 1.0 mL Minimum Volume 0.8 mL (Note: This volume does not allow for repeat testing.) Respiratory Syncytial Virus (RSV), Immunoassay 014548 Limitations A positive result may occur in the absence of viable virus. In the event of a negative result, infection due to RSV cannot be ruled out because the antigen present may be below the detection limit of the test. A negative test is presumptive, and it is recommended by the assay manufacturer that these results be confirmed by another method. SCN1A Family-targeted Sequencing 511274 Container Lavender-top (EDTA) tube or yellow-top (ACD) tube SCN1A Sequencing, Full Gene 511236 Serotonin 120204 Minimum Volume 1.0 mL Sodium, 24-Hour Urine 003178 Container Plastic urine container without preservative Thyroid-stimulating Hormone (TSH) 004259 Reference Interval Age μIU/mL 0–6 d 0.700–15.200 7 d–3 mo 0.720–11.000 3 mo 1 d – 12 mo 0.730–8.350 1y–5y 0.700–5.970 6–10 y 0.600–4.840 >10 y 0.450–4.500 Vitamin A 017509 Volume 1.0 mL Vitamin B6, Plasma 004655 Minimum Volume 1.0 mL Vitamin C 001479 Volume 1.0 mL Minimum Volume 0.5 mL Vitamin E 081000 Volume 1.0 mL Note: For the most current test information, please consult the online Directory of Services and Interpretive Guide at https://www.labcorp.com/wps/portal/provider/testmenu. 9 Volume XIV, Nº 10 – 11 LabHorizons October – November 2014 CPT Code Updates Test Name Nº CPT(s) Chromosome Analysis, Amniotic Fluid 052040 Contact CPT coding department at 800-222-7566, ext 6-8400. Chromosome Analysis, Amniotic Fluid With Reflex to SNP Microarray (Reveal®) 052104 Contact CPT coding department at 800-222-7566, ext 6-8400. Chromosome Analysis, Blood (Constitutional) 511035 Contact CPT coding department at 800-222-7566, ext 6-8400. Chromosome Analysis, Blood (Constitutional) With Reflex for Y Deletion Analysis 511075 Call client services. Chromosome Analysis, Chorionic Villi Biopsy 510988 Contact CPT coding department at 800-222-7566, ext 6-8400. Chromosome Analysis, High Resolution 052215 Contact CPT coding department at 800-222-7566, ext 6-8400. Chromosome Analysis, Leukemia/Lymphoma 510999 Call client services. Chromosome Analysis, Prenatal Cordocentesis and Fetal Hemoglobin 511025 Contact CPT coding department at 800-222-7566, ext 6-8400.. Chromosome Analysis, Products of Conception (POC) With Reflex to SNP Microarray (Reveal®) 052065 Contact CPT coding department at 800-222-7566, ext 6-8400. Chromosome Analysis, Tissue Biopsies (Products of Conception, Skin) 052052 Contact CPT coding department at 800-222-7566, ext 6-8400. Chromosome Analysis With Reflex to SNP Microarray−Pediatric (Reveal®) 052045 Contact CPT coding department at 800-222-7566, ext 6-8400. Chromosome Five-cell Count Plus Microarray (Reveal ), Amniotic Fluid 511590 81229. If additional testing is performed, concomitant CPT codes/charges will apply. Chromosome Five-cell Count Plus Microarray (Reveal®), CVS 511555 81229. If additional testing is performed, concomitant CPT codes/charges will apply. 510770 Contact CPT coding department at 800-222-7566, ext 6-8400. ® Microdeletion Syndromes, FISH Multiple Myeloma Profile, FISH 510325 Call client services. Prenatal Aneuploid Evaluation, Amniotic Fluid, FISH 510365 Contact CPT coding department at 800-222-7566, ext 6-8400. Prenatal Aneuploid Evaluation, Chorionic Villus Sampling, FISH 510960 Contact CPT coding department at 800-222-7566, ext 6-8400. SNP Microarray, Whole Blood (Reveal ) 511535 81229. If additional testing is performed, concomitant CPT codes/charges will apply. ® Deleted Procedures Deleted Tests Test Nº LabCorp Offers Test Nº Androstenedione, Ultrasensitive 503859 Androstenedione LCMS (Endocrine Sciences) 500152 CML FISH Reflex to Qualitative JAK2V617F Mutation Analysis 510980 CML FISH Reflex to Qualitative JAK2V617F Reflex to JAK2 Exon 12 Mutation Analysis 510970 CML FISH Reflex to JAK2V617F Mutation Analysis, Qualitative, With Reflex to CALR Mutation Analysis, JAK2 Exon 12 Mutation Analysis and MLP Mutation Analysis 511595 DHEA-Sulfate, Ultrasensitive 503895 DHEA-Sulfate (Endocrine Sciences) 500161 Growth Hormone, Urine 24 Hour 500330 No replacement is available. Human Immunodeficiency Virus 1/O/2 (HIV-1/O/2) Antibody With Reflex to NAA 083850 HIV-1/O/2 Antigen/Antibody Preliminary Test With Cascade Reflex to Supplementary Testing 083935 JAK2V617F Mutation Analysis, Qualitative, With Reflex to JAK2 Exon 12 Mutation Analysis 489230 JAK2 Mutation Analysis, Qualitative, with Reflex to JAK2 Exon 12 Mutation Analysis and MPL Mutation Analysis 489395 489370 JAK2V617F Mutation Analysis, Qualitative, With Reflex to CALR Mutation Analysis, JAK2 Exon 12 Mutation Analysis and MPL Mutation Analysis Testosterone, Ultrasensitive 503888 V617F No replacement is available. The CPT codes included in this publication are in accordance with Current Procedural Terminology, a publication of the American Medical Association. CPT codes are provided here for the convenience of our clients; however, correct coding often varies from one carrier to another, and LabCorp may bill specific carriers using codes other than those shown. Clients who bill for services should verify the codes with the applicable payor to confirm that their use is appropriate in each case. ©2014 Laboratory Corporation of America® Holdings All Rights Reserved. L13628-1114-1 10
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