Syllabus–Spring 2015 CH 204 Intro to Chemical Practice-FRI & CH 108 Conference Course-FRI Unique Numbers: 50280 and 50650 Lecture: Wednesday 1-2 PM in CLA 1.106 I. General Information Laboratory Personnel Visit: sbrs.cm.utexas.edu/people.html for photos and biographical information for all SBRS staff Research Educator (Primary Instructor): Dr. Elizabeth Ilardi |[email protected] Office: WEL 5.418 | Office Phone 512.471.6706 Principal Investigator Dr. Stephen F Martin | [email protected] | WEL 5.334 Teaching Assistant: Christopher Farley | [email protected] (OH: Fridays 1–2 PM, WEL 4.132B) Mentors: Lead Mentor in Chemistry: Layla Nejad [email protected] Lead in Biochemistry: Ayesha Mahmood [email protected] Devin Bradburn [email protected] Cynthia Coots [email protected] Liem Do [email protected] Christian Kaculini [email protected] Jamie Lee [email protected] Eileen Sullivan [email protected] Samuel Younan [email protected] Webmaster: Irnela Bajrovic [email protected] Course Websites Canvas: http://canvas.utexas.edu/ Announcements and weekly requirements SBRS Group page: http://sbrs.cm.utexas.edu/ (lab manual, experiment resources) Laboratory Materials •The National Brand Computation Notebook ($15): Our student American Chemical Society chapter will be selling this notebook in the main hall of Welch from 10 AM–2 PM during the first two weeks of classes. • Scientific Calculator: Some are available in lab. It may be more convenient to have your own. Due to risk of contamination by lab chemicals, you should not use your phone as your calculator. 1 Safety Information If you are pregnant or become pregnant during the semester, you must consult with the instructor immediately about your eligibility to continue the course. You are required to read and adhere to the safety guidelines outlined in the laboratory manual introduction (sbrs.cm.utexas.edu/labmanual), and must have OH 101, OH 102, and OH 202 credit prior to working in the lab. OH 102 is also required, and will be provided in the first week of lab. Disabilities: Students with disabilities may request appropriate academic accommodations from the Division of Diversity and Community Engagement, Services for Students with Disabilities, 512-471-6259. Quantitative Reasoning Flag: This course carries the Quantitative Reasoning flag. Quantitative Reasoning courses are designed to equip you with skills that are necessary for understanding the types of quantitative arguments you will regularly encounter in your adult and professional life. You should therefore expect a substantial portion of your grade to come from your use of quantitative skills to analyze real-world problems. II. Participation Attendance A. Weekly conference course (Wednesdays 1-2 PM, CLA 1.106): You are required to attend a weekly one-hour lecture. In this lecture, you will be given important information regarding that week’s experiment as well as information that will help you understand the larger impact and goals of your research project. Transfer students taking upper division credit will have a weekly research meeting in lieu of lecture. B. Lab Attendance (WEL 5.102): You are required to spend 6 hours minimum in lab weekly. Plan to work in 3-4 hour blocks; we will update you weekly about good stopping points for each experiment. We use Google calendar to sign up for lab time; there is a video to watch at http://sbrs.cm.utexas.edu/orientation.html. Please sign up for the week after noon on Sunday. Please do not sign up early or as a repeating event; it isn’t fair to others. I reserve the right to delete your time if you do. If you need to change your time, do so 12 h before the scheduled time. Failure to show up for scheduled time will result in a lowering of your attendance grade. **Attendance as described above is mandatory, and you may only miss one lecture without an excuse. Any missed lab hours must be made up. Any further unexcused absences will lower your final grade in the conference course.** Sign In Policy and Missed Labs Contact your RE, to make up missed weeks. Only those with a valid (preferably written) excuse will be given a make-up. A sign-in sheet is located in the lab. It is your responsibility to find your RE, TA, or a mentor to sign you out of lab. Please allow them time to check your space for cleanliness. Failure to sign in and out with signature will result in loss of credit for lab attendance. 2 III. Assignments and Grading Assignment Descriptions A. Pre-Laboratory Assignments (20 points each): The objective of the pre-lab is to verify that you understand the objective of the experiment you are about to perform, to work safely in the lab, and to prepare to organize collected data. Please see the requirements for individual pre-labs on Canvas. B. Prelab Questions (20-40 points): Prelab questions are required for most experiments, and will be due by 8 PM on the Monday of the week that the lab is performed. The prelab questions will be posted on Canvas. C. Literature Assignments (20–40 points): These assignments are to familiarize you with journal articles and to introduce you to computer programs that we use to search the scientific literature. These assignments are distributed throughout the semester; see the syllabus or Canvas for due dates. D. Discussion Board (200 points): 2 weekly posts, due by 5 PM each Saturday. We will create a discussion forum for each experiment, and will post some common topics as threads. Review the threads and post in the one most closely related to your topic. Please only create new threads if an appropriate one is not already available. The weekly discussion on the main discussion board is mandatory. You may post any ideas you wish to discuss related to that week’s lecture, experiment, or science-related topics in the news. You can also post information regarding laboratory techniques you have performed and give tips to your fellow classmates. An original post and a reply to another person’s post are required. Please be respectful and considerate of others’ questions and comments. You may post more than twice, but be sure to post twice weekly. Mentor Samuel Younan will be the primary moderator of the discussion board, and you may direct questions to him. E. Reports (100-300 points): The report will include all of the data collected in lab, and a typed report including analysis of the data. More information will be provided for each specific report. PLAGIARISM: Do not plagiarize or cheat; anyone caught doing so will, at the very least, lose credit for the assignment, and may receive an F in the course. 3 Experiments by Week WEEK 1 (Week of Jan 19) 2 (Week of Jan 26) 3 (Week of Feb 2) 4 (Week of Feb 9) 5 (Week of Feb 16) 6 (Week of Feb 23) 7 (Week of Mar 2) 8 (Week of Mar 9) 9 (Week of Mar 23) 10 (Week of Mar 30) 11 (Week of Apr 6) 12 (Week of Apr 13) 13 (Week of Apr 20) 14 (Week of Apr 27) 15 (Week of May 4) Lab/Activities Drop in lab for OH 102 & Lab Scavenger Hunt – Sign up on Doodle Calendar (check your email for the link). Please attend the first lecture on Wednesday 1–2 PM. Assignment: Complete safety training if you have not already received credit (OH 101, 201, 202). You do not need to redo training. Experiment 1: Separation of an organic compound from a mixture Experiment 2: Solution preparation for Experiment 3 Prelab Questions E2: Solutions and stoichiometry Literature Exercise 1: The UT Library Experiment 3: Amino acid titration Prelab Questions E3: Standardization and Titration Experiment 4: Separation of a mixture of organic compounds by twobase extraction Prelab Questions E4: Two-Base Extraction Literature Exercise 2: Locating an article by citation Experiment 5: Properties and reactions of amino acids Prelab Questions E5: Protein structure Literature Exercise 3: Exploring chemistry websites Experiment 6: Modeling programs–NO PRELAB Experiment 7: Chromatography Prelab Questions E7: Chromatography and polarity SPRING BREAK Experiment 8: Kinetic vs. thermodynamic control (in pairs) Literature Exercise 4: Introduction to Reaxys Experiment 9 (Part 1): Synthesis of N-pivaloyl-O-toluidine Prelab Questions E8: Airfree Technique Experiment 9 (Part 2): Titration of an organolithium reagent Literature Exercise 5: SciFinder Experiment 10, Part 1: Ligand synthesis Literature Exercise 6: Reaxys: Planning a synthesis Experiment 10, Part 2: Ligand synthesis Prelab Questions E9, part 1: Synthesis Lab Clean Up and Lab Move (6 hours of assistance is required from each student this week) Final Postlab Due 4 Assignment Due Dates and Grading Policy Late assignments will be graded and will receive half credit of the final grade. Any assignment that is more than one week late will receive a zero. Plus and minus grades will be given for assignments and final grades. **Due dates are subject to change!** Reminder: Pre laboratory assignments (A, Section VII) are due for the entire experiment the week you begin that experiment. Some weeks, groups will be performing different experiments. It is your responsibility to know which lab to complete the prelab for. Prelab questions (B, Section VII), literature assignments, and reports are due as indicated below: Assignment Pre Laboratory Assignments (cumulative): 20 pts each, 11 assignments Scavenger Hunt Sheet Prelab Questions E2: Acid–base chemistry & solutions Literature Exercise 1: The UT Library Prelab Questions E3: Titration POSTLAB 1: Solubility & Solutions Prelab Questions E4: Two-Base Extraction POSTLAB 2: Titration & Acid-Base Chemistry Literature Exercise 2: Locating an article by citation Prelab Questions E5: Protein structure Prelab Questions E7: Chromatography and polarity POSTLAB 3: Amino Acids Literature Exercise 3: Exploring chemistry websites POSTLAB 4: Chromatography Prelab Questions E8: Airfree Technique Literature Exercise 4: Introduction to Reaxys Literature Exercise 5: SciFinder Literature Exercise 6: Reaxys: Planning a synthesis POSTLAB 5: Thermodynamics & Organic Synthesis Prelab Questions E10: Synthesis & Spectroscopy POSTLAB 6: Research Report Points 220 20 25 20 30 100 35 200 20 40 40 200 30 100 30 30 30 40 200 40 300 Due Date Mondays by 11 AM 1/26/15 (8 PM) 2/2/15 (8 PM) 2/9/15 (8 PM) 2/9/15 (8 PM) 2/12 (12 PM) 2/16/15 (8 PM) 2/26 (12 PM) 2/23/15 (8 PM) 2/23/15 (8 PM) 3/9/15 (8 PM) 3/12/14 (12 PM) 3/2/15 (8 PM) 3/19/15 (12 PM) 3/30/15 (8 PM) 3/30/15 (8 PM) 4/13/15 (8 PM) TBA 4/16/15 (12 PM) 4/20/15 5/8/15 (10 AM) 5
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