'The new Lamina™ Multilabel Slide Scanner and Vectra® Automated Pathology Imaging

'The new Lamina™ Multilabel
Slide Scanner and Vectra®
Automated Pathology Imaging
System – quantitative
pathology solutions for cancer
immunology'
Bianca Beusink, PhD
Imaging Sales Specialist
[email protected]
© 2013
2009 PerkinElmer
PerkinElmer Tissue Imaging Portfolio …
inForm® Tissue Finder™
inForm® Cell Analysis™
Intelligent Image Analysis Software
Lamina™
Slide
scanner
Nuance™
Multispectral
Imaging
Systems
Vectra® Slide Analysis System
… Capturing molecular and spatial complexity,
while providing reliable quantitative results
Imaging solutions from single cell to live animal…
Only PerkinElmer offers a range of imaging solutions that let you locate, detect,
analyze and share your results your way
3D and confocal
High-content
imaging
Quantitative
pathology
Pre-clinical in vivo
imaging
Ultraview®
Opera® and
Operetta®
Vectra® and
Lamina™
IVIS® Spectrum
and Quantum CT
— whether you are studying single cells in depth, screening cell populations,
examining tissue sections or monitoring biological processes in whole animals.
…for important new discoveries in disease research
Lamina Multilabel Slide Scanner
…for a clearer vision of pathology
Lamina specs
…for fast slide scanning
Lamina
Lamina is a high-throughput multilabel slide scanner that delivers the
highest quality H&E, IHC and immunofluorescence whole-slide images
for research pathology. With our unique technology we reduce
autofluorescence and correct cross talk to give the clearest visualization
of fluorescently labeled markers in FFPE tissues.
More accurate results improving our
understanding of disease
…for a clearer vision of pathology
Lamina
Lamina
250 slides, highest speed and quality FL scanning
Proprietary autofluorescence reduction technology
inForm Tissue Finder analysis software (X2 Copies)
Lamina - Best FL quality
250 slides, highest speed and quality FL scanning
Lamina demo (PKI slides)
RGB
Unmixed composite
DAPI,
AF488,
AF594
…autofluorescence reduction technology
PerkinElmer Tissue Imaging Portfolio …
inForm® Tissue Finder™
inForm® Cell Analysis™
Intelligent Image Analysis Software
Lamina™
Slide
scanner
Nuance™
Multispectral
Imaging
Systems
Vectra® Slide Analysis System
… Capturing molecular and spatial complexity,
while providing reliable quantitative results
Immune Cell Phenotyping in Solid Tumors
Our approach allows different phenotypes to be visualized and
quantified simultaneously in the same tissue section, enabling
researchers to study the relationships and distribution of these cells
within tumors and the tumor microenvironment
Melanoma TMA core with multiplexed immunofluorescence staining
Conventional Image
DAPI
CD8 – Cy3
CD34 – Cy5
FoxP3 – FITC
PD-L1 – coumarin
Melanoma TMA core with multiplexed immunofluorescence staining
Unmixed composite:
DAPI – blue
CD8 – green
CD34 – yellow
FoxP3 – purple
PD-L1 – red
Melanoma TMA core with multiplexed immunofluorescence staining
Tissue segmentation:
Tumor region – red
Stroma region – green
Blank – blue
Melanoma TMA core with multiplexed immunofluorescence staining
Per-cell quantitation
Blue – CD8-/FoxP3Green – CD8+/FoxP3Red – CD8-/FoxP3+
Yellow –
CD8+/FoxP3+
Melanoma TMA core with multiplexed immunofluorescence staining
Compartment-specific
cell counts
Melanoma TMA core with multiplexed immunofluorescence staining
Per-cell intensity
quantitation
PD-L1 0-3+ Positivity:
Blue – 0+ (73.13%)
Yellow – 1+ (24.06%)
Orange – 2+ (2.39%)
Red – 3+ (0.42%)
H-Score = 30
Benefits of using multispectral imaging
Multispectral imaging technology is used to acquire images at many wavelengths
to better determine fluorophore/stain distribution in cells or tissue
420nm
490nm
720nm
Monochrome
Color (RGB)
Multispectral
Acquiring a series of narrow-band monochrome images leads to a
spectrum of the sample at each pixel
1. Take images at different wavelengths with
a CCD
5 Quantum dot vials
525, 565, 585, 605 and 655 nm
2. Assemble the data into a “cube” in memory
3. This creates a spectrum
at every pixel of the CCD
Spectra
650 nm
625 nm
x
600 nm
575 nm
550 nm
y
z
What is spectral unmixing?
RGB image calculated from spectral image data
simulated fluorescence
image
Nuance composite
image
Nuance unmixed images
…showing its true colors
Multiple antigens can be resolved in brightfield: a breast ER and PR
example with a counterstain
RGB image
Nuance image
BF and FL Views
ER image
PR image
Hematoxylin image
…separating the brown from the red
Pushing the limits of color separation using spectral unmixing
Example: Red vs. Red vs. Red
Liquid Permanent Red
Vector Red
AEC
Sample courtesy of Chris van der Loos, University of Amsterdam
Bottom line: We can separate
as many colors as you can
reliably put into your sample
…more than meets the eye
inForm is user-trained to find regions of interest
1. Load images
2. Draw training regions
3. Segment image
…easy does it
Breast involution: Segmenting H&E-stained breast section
Red:
Green:
Blue:
Yellow:
Cyan:
Acini
Lobular stroma
Structural stroma
Inflammation
Fat cells
…what is the percentage of inflammation?
Breast involution: Segmenting H&E-stained breast section
Red:
Green:
Blue:
Yellow:
Cyan:
Acini
Lobular stroma
Structural stroma
Inflammation
Fat cells
19.8 %
32.3 %
38.9 %
4.9 %
10.8 %
… were you close?
PerkinElmer Tissue Imaging Portfolio …
inForm® Tissue Finder™
inForm® Cell Analysis™
Intelligent Image Analysis Software
Lamina™
Slide
scanner
Nuance™
Multispectral
Imaging
Systems
Vectra® Slide Analysis System
… Capturing molecular and spatial complexity,
while providing reliable quantitative results
Thank you for your attention!
Any questions?
Come visit our booth! # 7A067
...and have a closer look at the lamina!