Biological Sciences and Bioengineering, IIT Kanpur Spider’s silk: Investigation of spinning process, web material and its properties Rohit S. Gole 1 and Prateek Kumar 2 1, 2 Department of Biological Sciences and Bioengineering, Indian Institute of Technology Kanpur, Kanpur-208016 Spider silk has outstanding mechanical & structural properties, despite its light and delicate appearance, like high strength and exceptional toughness. Silk is twice as stretching nylon and eight times more strong than steel. Studying the structural aspects, which bring out these properties, is of great interest to biopolymer research. It is tougher, stretchier, and more waterproof than the silkworm's strands used today in fine garments. Among the many types of silk that have been characterized till now, the most important varieties include cocoon silk fibroin from the silkworm, Bombyx mori & the dragline silk from the spider Nephila clavipes. The building blocks of spider’s silk are primarily non essential amino acids, Glycine and Alanine & the alignment of these amino acids in various ways is responsible for the unique properties. Insects have found many ways of making a wide range of silk types, but web spiders are unique in maintaining, in the same individual highly specialized glands producing different silks, often simultaneously. Spider spin silks for its various purposes like, dragline silk used to stick the whole web to the wall, glue like sticky catching silk used to catch its prey. Various spiders build up different web pattern, like all orb weaving spiders make suspended, sticky, wheel-shaped orb webs which they place in openings between trees and shrubs where insects are likely to fly, others build up ladder or spiral shaped web for catching their preys. Scientists are trying to find out: How spider spins silk in its glands? Successful copying of the spider's internal processing and precise control over protein folding, combined with knowledge of the gene sequences of its spinning threads, could permit industrial production of silk-based fibers with unique properties. Keywords: Spider, silk, silkworm, cocoon, glands, orb, spinning threads, web. 1. Introduction Love them or hate them, we've got to admit that spiders are some pretty impressive, wellequipped animals. They have a heavily armored body and a highly effective venom injection system. How many other creatures can claim that? These remarkable adaptations have made spiders some of the most successful carnivores in history. In their 400 million years of existence, they've spread over every part of the earth. Today, there are more than 40,000 known spider species, and potentially thousands more we haven't discovered yet. The evolution of spider and its correlation with the evolutionary success gives a vivid and fascinating thought. The cooccurrence of the spider silk evolution with spider speciation in the evolutionary history of spiders draws our attention and motivates us to study and find out the clever trick of the nature. The two important evolutionary events in spiders – the divergence of the advanced spiders from the primitive spiders and the divergence of modern orb weavers from the primitive orb weavers coincide with the evolution of two types of silk-producing glands, the major ampullate gland and the flagelliform gland. This suggests a link between silk protein evolution and spider evolution. Despite the process’s high ATP requirements, spiders have evolved ways of efficient cost management; they consume and recycle their own silk. Some spider Silk is the key to the spider’s success, with behavior playing merely a supporting role. Without their silk, spiders would be weak-lings among their arthropod peers (if they had survived at all). They are soft-bodied and so are prone to physical damage; they breathe through lungs, and are in constant need of high humidity; and they are wingless, and their hydraulically driven legs buckle when overused. As a result, spiders would have been no match for the tough and virtually indestructible insects. But silk gives spiders a distinct edge, and has become the main weapon in an arms race with their insect relatives, which are both their main prey and major predators. Interestingly, all the silk proteins, including those of spiders show the predominance of the three amino acids: Alanine, Glycine and serine, the composition of which, of course, varies with the silk type. The variability lies in the sequence, length and number of these repeats. Many spiders have special adaptations that allow them to walk easily on smooth and vertical surfaces. The end of each leg is covered with thick brushes of hair. All the tiny feet grip the small bumps on whatever the spider is walking on, allowing the spider to move easily over most terrain. Here we describe the phylogeny of spider and also give a brief description of its body organs. Furthermore we describe the highly efficient spinning glands and different weaving patterns of web. And then we also describe the structure and properties of silk. Finally we look at the different biotechnological applications and further research possible in this fascinating field. 2. Spider Basics Spiders are look like insects and come in to the category of Arthropoda, but they belong to a completely different class of animals, called Arachnida. Spiders make up the order Araneae within this class, which also includes mites, ticks and scorpions. While spiders vary considerably in size, shape and behavior, nearly all species share a basic set of characteristics: • They have eight legs, made up of seven segments each. • • • • • They feed primarily on insects. They can inject venom into their prey. They can produce silk. They have a pair of small appendages on the head, called pedipalps. Their bodies are divided into two sections, the cephalothorax and the abdomen, joined by the thin pedicel. The cephalothorax -- a fused head and thorax -- distinguishes spiders from insects, which have a separate head, thorax and abdomen. The cephalothorax contains the brain, stomach, eyes and mouth, and the abdomen contains the heart, digestive system, reproductive organs and lungs. Spiders have two different types of respiratory systems -trachea and book lungs (most species have both, but some have one or the other). Compared to human beings, these respiratory systems are very simple. Trachea is just long tubes that run from a slit in the exoskeleton through the body. Air flows in, oxygen diffuses into the blood and carbon dioxide diffuses into the air. The spider's normal movement provides all of the necessary energy to push air in and out. Book lungs are a series of very thin, leaf-like structures. The inside of each leaf is filled with blood, and the outside is exposed to air. The spider's blood, called hemolymph, circulates oxygen, nutrients and hormones to the different organs in the body. Unlike humans, spiders have an open circulatory system. The spider's simple heart -- a tube surrounded by a muscle, with a one-way valve on each end -- pumps blood into the body cavity, all around the spider's organs. One of the most amazing things about spiders is how much they can accomplish with such a small brain. The spider's central nervous system is made up of two relatively simple ganglia, or nerve cell clusters, connected to nerves leading to the spider's various muscles and sensory systems. The simple instructions encoded in these nerve cells give spiders all the information they need to undertake complex tasks, such as building webs and attacking prey. Some species even exhibit learning behavior. Spiders have an exoskeleton -- a stiff support structure on the outside of the body. Exoskeleton segments are connected together with joints so the spider can move them back and forth. Muscles attached on the inside of the exoskeleton contract to move the legs inward, but spiders don't have any muscles to extend the legs back out again. Instead, they have to force bodily fluids (mainly blood) into the legs to push them outward. If a spider loses too much body water, it can't generate the necessary hydraulic pressure to push its legs out. Spider can shed its old cuticle exoskeleton (this is called molting). Molting occurs frequently when a spider is young and some of them can do it throughout their life. 3. Silk’s structure Spider silk is a biopolymer fiber. Its composition is a mix of an amorphous polymer (which makes the fiber elastic), and chains of two of the simplest proteins (which give it toughness). Out of 20 amino acids, only Glycine and Alanine serve as a primary constituent of silk. The Dragline silk of orbweb spider seems to be most studied in the scientific research. The protein in dragline8 silk is fibroin (Mass of 200,000-300,000 Daltons) which is a combination of the proteins spidroin 1 (Alanine-rich) and spidroin 2 (Glycine-rich), the exact composition of these proteins depends on species. Fibroin consists of approximately 40% Glycine and 25% Alanine as the major amino acids. The remaining components are mostly glutamine, serine, Leucine, Valine, Proline, tyrosine and Arginine. Spidroin6 contains polyalanine and polyglycine rich (chains of Alanine and Glycine respectively, these molecular chains are linked together by hydrogen bonds) regions where from 4 to 9 Alanine or Glycine molecules are linked together in blocks. The high elasticity of spider silk is due to Glycinerich regions where a sequence of multiple (approximately 5 - dependant on silk type) amino acids are continuously repeated. A 180° turn (α-turn) occurs after each sequence, resulting in α-spiral (or α-helix). Capture silk, the most elastic kind, contains about 43 repeats on average and is able to extend 2-20 times (>200%) its original length whereas most dragline silk for example will only repeat about 9 times and is only able to extend about 30% of its original length, it is clear that the repetitions and forming of the helixes (based on the original amino acid sequence) contributes considerably towards the silk's resulting properties. The fluid dope is a liquid crystalline solution where the protein molecules can move freely but some order is retained in that the long axis of molecules lie parallel, resulting in some crystalline properties. It is thought that the spidroin molecules are coiled in rod-shaped structures in solution and later uncoil to form silk. During their passage through the narrowing tubes to the spinneret the protein molecules align and partial crystallization occurs parallel to the fiber axis. This occurs through self-assembly of the molecules where the polyalanine regions are linked together by hydrogen bonds to form pleated β-sheets (these are well ordered crystalline regions as shown in the figure 1). These β-sheets act as crosslink between the protein molecules and it is because of the regular structure of these sheets that spider silk has such a high tensile strength. It is not purely coincidence that the major amino acids in spider silk are Alanine and Glycine. They are the simplest two amino acids and do not contain bulky 'R' groups) so are able to pack together tightly, resulting in easier formation of the crystalline regions. The crystalline (β-based) regions are hydrophobic (anti-water) which aids the loss of water during the polymerization process (solidification). This would also explain why spider silk is insoluble as water cannot pass through the densely spaced hydrogen bonds. The Glycine-rich spiral regions of spidroin aggregate to form amorphous areas and these Figure 2: The above diagram shows how the highly ordered β-sheets connect to the less crystalline regions via extremely amorphous regions of Glycine-rich αhelixes. 3. Silk-spinning process Figure 1: The above diagram shows how the crystalline structure of the beta (β) sheets are formed by the polar aligning of the protein molecules. are the elastic regions of spider silk. Less ordered Alanine-rich crystalline regions have also been identified and these are thought to connect the β-sheets to the amorphous regions, it is these regions which give the silk its elasticity. Overall, a generalized structure of spider silk is considered to be crystalline regions (Glycine-rich) in an amorphous matrix (Alanine-rich).Kevlar has also a similar structure. The main thing that distinguishes spiders from the rest of the animal kingdom is their ability to spin silk, an extremely strong fiber. Most of the spiders are able to sustain their lives on these efficiently build webs, catching their preys in them. Spiders have several spinneret glands located at the spider's abdomen which produce the silken thread. Each gland produces a thread for a special purpose. Seven different gland types have been identified till now, although all the glands may not present in the same species. Scientists don't know exactly how spiders form silk, but they do have a basic idea of the spinning process. Spiders have various specialized silk secreting glands that secrete spinning dope (a solution containing the protein molecule used to make the silk fiber), which is dissolved in a water-based solution inside the glands only. While in the gland the secretion is a water soluble viscous fluid, but upon being drawn through spinnerets, its molecular arrangement changes and becomes insoluble and ten times denser than the fluid state. The spider pushes the liquid solution through long ducts, leading to microscopic spigots on the spider's spinnerets. Spiders typically have two or three spinneret pairs, located at the rear of the abdomen. Each spigot has a valve that controls the thickness and speed of the extruded material. As the spigots pull the fibroin protein molecules out of the ducts and extrude them into the air, the molecules are stretched out and linked together to form long strands. The spinnerets wind these strands together to form the steady silk fiber. As an example we can discuss the production of dragline silk by Nephila clavipes, which is best understood among the scientists. The major gland making this silk consists of a long tail10 and a wider sac called the Ampulla. The tail secretes the major part of spinning dope, while the sac constitutes the main storage place that leads, through a funnel, to a tapering duct. The secretory part of the gland has two distinct zones, the Azone occupying the tail and two third part of the sac, and the B-zone comprises of the rest part of the sac which run to the funnel. The epithelium of the A-zone is composed of tall columnar secretory cells of a single type, packed with secretary granules. The A zone secretes an aqueous and highly viscous, often yellow solution of about 50% protein, which will be mostly spidroin I and II (the main proteins making up spider dragline silk). As the A-zone secretion flows towards the funnel it is coated by a colorless homogeneous viscous liquid, possibly the glycoprotein secreted in the B-zone. The glycoprotein may help to plasticize the thread by maintaining a high water content. The silk material exits the gland through a funnel that connects directly to the long duct where actually protein orientations into a fiber begin. The duct is thereby divided into 3 limbs or sections which progressively grow narrower towards the spinneret and spigot. A valve is located just prior to the spinneret. The duct itself has a thin cuticle, which acts as a dialysis membrane and may allow water and sodium ions out of the lumen, and potassium ions, surfactants and lubricants into the lumen to facilitate thread formation. Within the glands and the first and second loop of the spinning duct, the spider's dope is liquid crystalline, with the main silk protein constituent likely to be in a compact conformation that allows it to be processed at high concentrations. The duct's convergent, or hyperbolic, geometry forces the dope flowing along it to elongate at a constant rate which also ensures that only low and uniform stresses are generated which prevents localized coagulation centers from forming early before the dope have reached their optimal orientation. Good molecular alignment contributes significantly to the thread's toughness. The drawdown process is mainly internal and starts in the third limb of the duct. The high stress forces generated during this stage of processing probably bring the dope molecules into alignment, so that they are able to join together with hydrogen bonds to give the anti-parallel beta conformation of the final thread. As the silk protein molecules aggregate and crystallize, they will become more hydrophobic, inducing phase separation and hence the loss of water from the surface of the solidifying thread. From here finally, the thread is gripped by the flexible and elastic lips of the spigot, through which it passes to the outside world. The spigot strips off the last of the aqueous layer surrounding the thread, thus helping to retain water in the spider, and also places the thread under tension for the final air-drawing step. Nephila clavipes has 3 pairs of spinnerets (figure 3) called anterior laterals, posterior laterals and posterior medians, and can spin seven different types of silk made from different silk glands. The dragline silk is secreted by the major ampullate glands, exits from spigots on the anterior lateral spinnerets. Most spiders have six spinnerets, some have four or two. They move independently and in concert to build webs. Silk is not ejected under pressure, but is drawn out by external means by a force such as wind or gravity. Most spiders have multiple silk glands, which secrete different types of silk material optimized for different purposes. By winding different silk varieties together in varying proportions, spiders can form a wide range of fiber material. Spiders can also vary fiber consistency by adjusting the spigots to form smaller or larger strands. Spider might coat the silk with various substances suited for different purposes, for example a sticky substance, or a water-proof material. 4. Weaving its web Different spiders build up their webs in different ways. The pattern & the structure of the web vary among various species of spider. We can take the example of Araneidae which is a large family of spiders. All species in this family, if they make webs, they make vertical or horizontal orb webs. Some species construct some sort of stabilizer in the center of the web. Some members in this family do not make web at all. Following is the list of various orb web spiders: • • • • • • Garden orb weaver spider (Figure 6) Scorpion-tailed Spider (Figure 7) Russian Tent Spider (Figure 8) Banded Orb-weaving spider (Figure 9) Tree-Stump Spider (Figure 10) Pan spider (Figure 11) The way spider builds up their webs is extremely economical. The spider recycles silk after use by eating it, so very little is wasted. This way the spider regains its lost energy in form of web by consuming the proteins present in the web. The weight of silk in the spider’s web is less than thousandth part of weight of spider’s body. This net-technology raises some problems for the spider. The spider has to make sure that the prey sticks to the web after hurtling the web & do not tear off the web. This problem can be solved by making the silk very elastic but at the same time taking care of the fact that the prey does not get recoiled back. The web threads are capable of stretching out to ten times their resting length & they also recoil slowly enough not to bounce the prey out of the web. The next feature that the silk needs, in order to keep the prey from escaping, is stickiness. The substance that coats the silk in the reeling operation is watery as well as sticky. Spiders negotiate in a unique way from sticking on to its own web. The legs spiders are anointed with special oil which provides some protection from the stickiness of the web. Also spider while building up her web leaves some of the threads i.e. the main spokes that radiate out from the centre of the web, non-sticky & she runs about on these main spokes only, using the specially modified feet (figure 4) ending in little claws to grip the fine threads. Figure 310. Image of the spinneret of the Cribellate orb web weaver utoborus showing different types of spigots Figure 411 : A scanning electron microscope (SEM) micrograph of the foot of the jumping spider E. arcuata. In addition to the tarsal claws, a tuft of hair called a scopula is found at the tip of the foot, which is what the spider uses to attach itself to surfaces. The long hairs which are distributed over the entire foot are sensitive to touch. Magnification 200x. (Image courtesy Institute Of Physics) Figure 5 :These triangular setup tips stick to surfaces by van der Waals force (20,000x magnification). Photo: Institute of Physics Eriophora transmarine Figure 6 Cyrtophora moluccensis Figure 8 Poltys illepidus Figure 10 Arachnura higginsii Figure 7 Argiope trifasciat Figure 9 Pan Spider Figure 11 The Garden Orb Web Spiders9 also called Araneus Spiders, Garden Orb-weaver, and Wheel weaving Spiders or Orb weaving Spiders. They build vertical orb web in garden and bushland. The way they construct their web is nothing less than the job of a well skilled engineer. To build up their web they follow pattern explained below with the help of figures 1222. • Spider releases a single thread5 with at its tip a tiny flattened silken sail or kite. This is to let the wind to blow the silk, until the silk connect with something (Figure 12). This way the spider sets up the bridge from where on she will start building up her web (Figure 13). • Spider then came back and forwards along the bridge thread, add more silk on it to make it stronger. Then she will start to set the centre of the web, & give it a ‘V’ shape (Figure 14). The two arms of ‘V’ are well placed to make two of the major spokes of the web. • Spider fixes a new thread to the point on the ‘V’ & reels herself down to ground to find an anchor point & fastens the vertical thread to the surface (Figure 15). • Then Spider put some frame threads between the anchor points. This will be the outside frame of the web (Figure 16). • After putting the frame threads, Spider starts to lay the radius threads. The silk • • • • used to make the frames and radius is not sticky. They serve for supporting purpose. And Spider will walk on that radius so she will not be entangled by her own silk (Figure 17). Spider goes back and ford from the web centre and the frame to lay the radius (Figure 18). Then Spider put the auxiliary spiral silk, from centre out to the frame. This auxiliary spiral silk is used by spider as reference for laying the capture spiral, the sticky silk. The auxiliary spiral silk will be removed later (Figure 19). When Spider reaches the outer most frames, she returns and starts to lay capture spiral, the sticky silk. She spirals from outside towards the centre. She uses the auxiliary spiral silk as reference, and will remove it at the mean time (Figure 20). The web is finished when Spider laid the stick silk close enough to the centre (Figure 21). Then she sits in the centre of the web, with each leg on each silk sensing if there is any prey get caught (Figure 22) .When the spider sit off the web ,she keeps in touch by a special signal thread running from retreat to the centre hub. This signal thread is under tension & it instantly transmits the signal to her about the prey being caught in the web. Figure 12 Figure 14 Figure 16 Figure 13 Figure 15 Figure 17 Figure 18 Figure 20 Figure 19 Figure 21 Figures 22 5. Biotechnological Applications of Spider’s Silk Current research in spider silk involves its potential use as an incredibly strong and versatile material. The interest in spider silk is mainly due to a combination of its mechanical properties and the non-polluting way in which it is made. The production of modern manmade super-fibres such as Kevlar involves petrochemical processing which contributes to pollution. Kevlar is also drawn from concentrated sulphuric acid. In contrast, the production of spider silk is completely environmentally friendly. It is made by spiders at ambient temperature and pressure and is drawn from water. In addition, silk is completely biodegradable. If the production of spider silk ever becomes industrially viable, it could replace Kevlar and be used to make a diverse range of items such as: • • • • • • • Bullet-proof clothing Wear-resistant lightweight clothing Ropes, nets, seat belts, parachutes Rust-free panels on motor vehicles or boats Biodegradable bottles Bandages, surgical thread Artificial tendons or ligaments, supports for weak blood vessels. Scientists hope to soon be able to spin spider silk without the aid of spiders - achieving an age-old human quest to harness one of nature's most remarkable materials. Randy Lewis is a professor of molecular biology at the University of Wyoming in Laramie. His team of researchers has successfully sequenced genes related to spider-silk production— uncovering the formula that spiders use to make silk from proteins. The most common method is introducing silk-spider genes into other organisms so that they can produce silk proteins that might later be used to create artificial silk threads. Host organisms range from simple bacteria to goats. There have been attempts to generate transgenic tobacco7 and potato plants that express remarkable amounts of recombinant Nephila clavipes dragline proteins. In the process the team acquired a better understanding of how the silk's structure is related to its amazing strength and elastic properties. By cracking the genetic code of spider silk, scientists hope not only to be able to duplicate the material but perhaps even to improve on it. Over hundreds of millions of years the 37,000 known species of spiders (and others unknown) have evolved and diversified many silks for their unique purposes. Best known and studied is silk secreted by a spider's major ampullate glands. The silk is also used to create spiders' familiar "wagon wheel" webs. Spider silk has incredible tensile strength and is often touted as being several times stronger than steel of the same thickness. What's even more unique, however, is spider silk's elasticity. "When we say spider silk is tougher than things like Kevlar [a plastic used to make body armor]. Kevlar has higher tensile strength but it's not very stretchy," said Todd Blackledge, an entomologist at the University of Akron. These properties suggest a potential for many applications for spider silk: extremely thin sutures for eye or nerve surgery, plasters and other wound covers, artificial ligaments and tendons, textiles for parachutes, protective clothing and body armor, ropes, fishing nets, and so on. "One that's initially surprising is air bags," Lewis added. "Right now an air bag just sort of blasts you back into a seat. But if it were made out of this material it would actually be made to absorb energy and really reduce impact." Current research focuses around these problems and a possible solution would be to adapt the composition of silk proteins to alter its properties. Research is still in its early stages but unraveling the secrets of spider silk is underway. References: 1. Vollrath, F. & Knight, D.P. Liquid crystalline spinning of spider silk. Nature 410, 541–548(2001). 2. Vollrath, F. & Knight, D. P. Structure and function of the silk production pathway in the spider Nephila edulis. Int. J. Biol. Macromol. 24, 243–249 (1998). 3. Lazaris, A., Arcidiacono, S., Huang, Y., Zhou, J.-F., Duguay, F., Chretien, N., Welsh, E.A., Soares, J.W. & Karatzas, C.N. Spider silk fibers spun from soluble recombinant silk produced in mammalian cells. Science 295, 472–476 (2002). 4. Forbes, Peter. The Gecko’s foot, Bio-inspiration : Engineered from Nature. Chapter 3 “Nature’s Nylon”. Pp. 55-78 5. Dawkins, Richard. Climbing Mount Improbable.1996. Chapter 2 "Silken Fetters." Pp. 32-63 6. Seidel, A. et al. Regenerated spider silk: Processing, properties, and structure. Macromolecules 33, 775–780 (2000). 7. Scheller, J., Guhrs, K.H., Grosse, F., Conrad, U. Production of spider silk proteins in tobacco and potato. Nature Biotechnology 19, 573- 577(2001). 8. Van Beek, J. D., Hess, S., Vollrath, F. & Meier, B. H. The molecular structure of spider dragline silk: Folding and orientation of the protein backbone. Proc. Natl Acad. Sci. USA 99, 10266–10271(2002). 9. http://www.geocities.com/brisbane_weavers/Garden_sp.htm 10. http://hubcap.clemson.edu/~ellisom/biomimeticmaterials/files/spiderbiology.htm 11. http://www.sciencedaily.com/releases/2004/04/040426054407.htm 12. http://www.wikipedia.org/
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