project presentation (pdf file)

High-Field NMR for Metabolite Fingerprinting in
Complex Biofluids
Institute for Analytical Sciences
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RESEARCH TOPIC
NMR methodology for the study of complex metabolite
mixtures in biofluids and tissues
European Center
for High Field NMR
State-of-the art spectrometers
World strongest 1000 MHz
NMR spectrometer
u
High-throughput equipments
for very high-field solution and
HR-MAS NMR metabolomics
Project: The project will be oriented to the development of novel
NMR strategies for high-throughput studies of metabolism by
solution or high-resolution magic-angle spinning (HR-MAS) NMR.
Unambiguous identification of individual metabolites (small
molecules) present in complex biofluids such as urine, blood serum
or culture media constitutes a crucial prerequisite for quantitative
metabolomics, towards better understanding of biochemical
processes in living systems. The proposed project will develop new
approaches based on projection spectroscopy for fast
multidimensional NMR correlation, and the combined use of novel
algorithms for efficient metabolite identification. Association of
separation methods for sample preparation will also be investigated
to increase the observable dynamic range in solution.
Background: The candidate should optimally have a strong background
in physical chemistry or chemistry. Additional knowledge of scientific
programming would be a plus, but is not required.
References:
1. Blaise B., Giacomotto, J., Triba, M. N., Toulhoat, P., Piotto, M., Emsley, L., Segalat, L., Dumas, M. & Elena, B. J. Proteome Res. 8, 2542-2550, (2009).
2. C. Pontoizeau, T. Herrmann, P. Toulhoat, B. Elena-Herrmann* and L. Emsley, Magn. Reson. Chem. 48(9), 727-733 (2010)
3. Choucha Snouber L., Bunescu, A., Naudot, M., Legallais, C., Brochot, C., Dumas, M. E., Elena, B. & Leclerc, E. Toxicol. Sci. 132, 8-20 (2013).
4. Jobard E., Pontoizeau, C., Blaise, B. J., Bachelot, T., Elena-Herrmann, B. & Trédan, Cancer Lett. 343, 33-41 (2014).
Supervisor and contact information
Institut des Sciences Analytiques
UMR 5280 CNRS / ENS Lyon / UCB Lyon 1
5 rue de la Doua, 69100 Villeurbanne, France
Dr. Bénédicte Elena-Herrmann
Email: [email protected]
Website: http://isa-lyon.fr/?profile_cct=benedicte-elena-herrmann