National DNA-library? A pilot collaborative study by the Swedish Agency for Marine and Water Management and SLU – Swedish Species Information Centre Malin Strand SLU Barcoding network Barcoding starts with a specimen with an identified species name. That is the tricky part! 2006-2009 marine inventory Sweden: 1200 species, 75 not known from Sweden (incl. 29 new to science) ID:d specimens preserved in ethanol!!! 2014-2015 DNA library starts 2015-2016 Barcoding is tested in marine monitoring? ??? Research contribution to library No match? Fuzzy match? Research 1200 species Bivalvia & Echinodermata Current status: 140 species/400 specimens sent to Canada Success rate? Validation? BOLD-konto administreras Malin Katrine Malin Kevin first batch valid barcodes May 2015? SHARK – most common sp in marine monitoring Which species in focus next round? IT infrastructure! GNM GNM ZOO databas Prover från Sekvenser GNM >ll iBOL/ BOLD Bilder Morphbank Bilder Naturarv migrering Specify data bas Voucherdata DNA-‐nyckeln BOLD + Genbank Naturforskaren 5 000 000 inventory 7 000 000 800 000 financial support to museums 300 000 2 000 000 a common national collection management system 2 500 000 SweBOL • Swedish Barcode of Life • Recently started secretariat (small scale, part time!) at the Swedish Museum of Natural History • Much to think of! Aim? Function? Strategy? Hosting organisation? Etc etc… • Ongoing collaboration w NorBOL works fine! National DNA-library? A pilot collaborative study by the Swedish Agency for Marine and Water Management and SLU – Swedish Species Information Centre Malin Strand SLU Barcoding network CGI: cost efficient to do 96 samples (2days) from tissue. Between 6000-8000 SEK from tissue to validated barcode (taxon-ID). Vi kommer då: utföra analyser med angiven kvalitétssäkring, tolka och analysera resultat, lagra DNA-extrakt tillsvidare, lagra överblivna prover ett år, lagra resultat och data digitalt i tre år efter överenskommelsens utgång, lagra data i referensbibliotek, samlingsföra prover om det är intressant för Naturhistoriska riksmuseet. Rumohr, H, Brey & Ankar 1987. A Compilation of Biometric Conversion Factors for Benthic Invertebrates of the Baltic Sea. The Baltic Marine Biol. Publ. sid 1-56. Thank you for your attention! Collaborators: GU - University of Gothenburg SLU - Swedish university of agricultural sciences NRM - Swedish Museum of Natural History GNM - Gothenburg museum of natural history HaV - Swedish Agency for marine and water management
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